Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3777 ATGCAGCATCTTGTTGCTATATGTGACCATTGTGGAGGCGGGGACAGGCTCCTGGAAAGTGGCGTAAGGTATGATACGGATTCCACAATTTTAAATGATGCCTTTGCGCTTTGCTGGGGCTGGTGGGGCTTGCGGGTGGATGATGACGGATTAATGGCCCCTACAAGGAAACCTAGAAGTGTGAATAAGAGGATTTCAAATTTAAATGAGGTCTCTCCTGGGAAAGAAGGAGTTAACTTCAATAAAAATAAGCAACGGAAGAAAAAGTTGTCAGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTGGAGCGATTTTATGAAGCATACCGGAAGTATGGGCAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAACAGATCCACTGAAATGGTAGAGGCACTTTACAGTATGAATCGGGCATACCTATCTTTGCCTGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCACTATAATGTGCTGGAAGGGAGCGATAGTGAAAGGGAGAGCAGTGAAGCATCTGAATCTCGAAAATCTATGAAACGAAAGCGTGGAAAAGTTCAACTTAGTGCACCAAAAGAATCTGTCCAGTCTCAATCGATTTCCTCCAATGATGGTTGCCTCTCTTTGTTGAAGAGAAGACGCTTTGATGGTAATCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGCATTCCAGTTTCCTATTCTTATAAGAAATATGATAGGGAAAATTATGTTTTGCCTCATAAAAGAAGCCTGAAGTCAGGGGTCAATGGTAATGACGATGAAGTTGCACATGTTGCAGCATTGGCATTAACAGAGGCTGCACAACGAGGGGGTTCCCCCCTAGTTTCCCGAACACCATACATAAGAGCAGAGAAGTCCTCTCCTGTTCAGAGTTGGGAAAGAATGTCAGAGACATCTCGTGCCAAGTTATGTGATGCTTCTATGTATGAGGAGTGCTTGGAAGGCAGTGTAGAAAGCAGAGAAGCTGGAACTGAAGAAAATGCTAGAGATACTAGTTCCATGATGGACATGGAAGGTTTTGGCACAGTTGAAATTTGTCAGAAGGGGAAGAAAGTTTACAGAAAGAGAGAAAGAGTGGAAAATGTCAGAAATCATCTGTTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGAGGGAATTGACATTAGTTCCTTGAAAGAAAAGGTTGATAATGAGGTTGCTGAGGCAAAACCTGAGCAGTCCTCTCCAAAAAGTCAGAGGAAAAGAAGTAAGAAACTTTATTTTGGAGATGAAAGCTCTGCCTTGGACGCTTTGCAAACTTTGGCTGATCTGTCTCTGATGATGCCTGCAGCGACTGTGGAATCAGGATCATCTATCCAGTTGAAAGAAGAAAGAATTGCTATAGAGGAAGATGACAAGTATGCTTTAGCTGAAACTTCATTGACAAGCCAAAGCAGAGACAAAATTAAACATCCAGGTCCAAAACAAAAGCTTGTTCATGTAGCTCCTGGAGTTGAGGGTACAAGCTCCAGAAAATCTATACTTGGAAGGGAATTGGCAAATGATTGTAATACTCTTTTTGAATTGAAAGAAAAGCTTCCCCCTTCTGATAGAACATGGAAAAGAAAGAGGAAATCAATCAGTTCAAAGGCGTCAAATGCAAAACTTGATTCTTCCCAACATAATGATCATTTGAATAATGAGTCTGTAGTTGATGAAGAGAGCAAACCTGGGATTAAAGGTAGACATATTAGTCAACATTTCACTCTCCCAAAACAGATGAAGTCAGTCAGATCTTCAGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTAACTTTATCAGCAGAAGTTCCACTCACAAATGAAGTTAGTGTACCAACAAAACAAAGTAGACGCAAAATGAGCCTACGGAGAACATTCATGCAGAAACAGAATTCTTCTGAAAACATAAATCAACCATATAAATACTCTGCTCCCCTCCAAGACAGGGCATTTTATCTAAAGGAAAAGCTTTCTGGTTGCATGTCATCTTATATGGTTCGTAGGTGGTGTACTTTTGAATGGTTTTATAGCGCAATTGATTATCCATGGTTTGCAAAAAGGGAGTTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACACGTGTTGAGTGGAGTGCCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGATCACTTTCTTCGTGAAGAAAGACAAAAACTTGAACAGTATCGGGAATCTGTGAGGAAACATTATACAGAACTGCATGCTGGTATTAGAGATGGACTTCCAACAGATTTAGCCAGACCTTTATTTGTTGGGCAACGAGTGATTGCTCTTCACCCAAAAGCAAGAGAGGTTCATGATGGGAGTGTGCTTACAGTTGACCATGACAAGTGCAGAATTCAGTTTGATCATCCAGAATTAGGGGTTGAATTTCTGATGGATATTGATTGCATGCCTATGAATCCATTGGATAACATGCCAGAAGCTCTGAGGAGGCAGAATGGTGCTGGAAAGGTCTCTGATACGAGTAAAGAGCCACTGATGAATGGAAATTCAACTACATGTACATCAAGTGGATCCCTTGAGAAGGCACCCACCCTTTCTGGTACCTTGGTAAAGCAGGGAAAGGATGATGTTGACCATGCCATTTCCCAATCAAAGGCTACTACAATCGATAACACCTGTGTACAAGAAGCAGCATATTCTCAACCTTGTACAATGACAATTCATCAAGCTAGGGAAGCTGATATACAAGCCCTTTATGAGTTGACTCGTGCTCTAGATAAAAAGGAAACATTGCTAATGGAGCTGAGAAACGCAAATAATGACATATTGGAAGACCAAAATGACATAGACTGCTTAAGGGATTCAGAGTCTTTCAGGAAGCATTACGCCACGGTTTCTTCTGCTTTGCTTCATCTGAGGCAACGTAATACTTATGCTGGAAACTCTCTGCCACCGTTGATGAAGGCCCAAGCAAGTTTCAATATTCATGAGGGCCTTGCCAATACATTGTATAGTTCTCTAGCACAAGACTTAGGGTCAACTGTTATTGAAATTATCAAAGGATCTAGGCTAAGAGCACATGGCATGGTGATTGGAGCAGTTCAGGCGTTGTCATCAACAAAGGAAGGTGATGACGCTTTAATGAAGATTGGGCAGGAATTGGATTCTATTGATAATCAGCAGTTGGCTTCAATCTCTAGGTTTCCCGTGATCAGGTCCCACGAGCTAGTGAATAGCAGTACTGGTCGCAATGACGAGTCAATTCACTGTTCATCAGAGGCTTTGCCTAGTGATGCATCTTGTCCCAAATTGCGTAATGACTCTGACAAAGTTGATAGTCAAATTCCATCAGAGCTTATCACTTCCTGTGTTGCTACATTGATCATGATACAGACTTGTACTGAGCGACAATACCCTCCGGCTGATGTAGCTCAGATATTAGACTCTGCGGTTACTAGCCTGCATCCGTGTTGTCCTCAAAACCTTCCTATTTACAGAGAAATCCAAATGTGCATGGGAAGAATCAAGACCCAGATTTTAGCTCTTATCCCAACTTGA 3597 0.4209 MQHLVAICDHCGGGDRLLESGVRYDTDSTILNDAFALCWGWWGLRVDDDGLMAPTRKPRSVNKRISNLNEVSPGKEGVNFNKNKQRKKKLSDKLGSQWSKEELERFYEAYRKYGQDWKKVAAVVRNRSTEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESSEASESRKSMKRKRGKVQLSAPKESVQSQSISSNDGCLSLLKRRRFDGNQPRAVGKRTPRIPVSYSYKKYDRENYVLPHKRSLKSGVNGNDDEVAHVAALALTEAAQRGGSPLVSRTPYIRAEKSSPVQSWERMSETSRAKLCDASMYEECLEGSVESREAGTEENARDTSSMMDMEGFGTVEICQKGKKVYRKRERVENVRNHLFDDGGEACSGTEEGIDISSLKEKVDNEVAEAKPEQSSPKSQRKRSKKLYFGDESSALDALQTLADLSLMMPAATVESGSSIQLKEERIAIEEDDKYALAETSLTSQSRDKIKHPGPKQKLVHVAPGVEGTSSRKSILGRELANDCNTLFELKEKLPPSDRTWKRKRKSISSKASNAKLDSSQHNDHLNNESVVDEESKPGIKGRHISQHFTLPKQMKSVRSSESSLCSDQKDLTLSAEVPLTNEVSVPTKQSRRKMSLRRTFMQKQNSSENINQPYKYSAPLQDRAFYLKEKLSGCMSSYMVRRWCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSAIKSSLGKPRRFSDHFLREERQKLEQYRESVRKHYTELHAGIRDGLPTDLARPLFVGQRVIALHPKAREVHDGSVLTVDHDKCRIQFDHPELGVEFLMDIDCMPMNPLDNMPEALRRQNGAGKVSDTSKEPLMNGNSTTCTSSGSLEKAPTLSGTLVKQGKDDVDHAISQSKATTIDNTCVQEAAYSQPCTMTIHQAREADIQALYELTRALDKKETLLMELRNANNDILEDQNDIDCLRDSESFRKHYATVSSALLHLRQRNTYAGNSLPPLMKAQASFNIHEGLANTLYSSLAQDLGSTVIEIIKGSRLRAHGMVIGAVQALSSTKEGDDALMKIGQELDSIDNQQLASISRFPVIRSHELVNSSTGRNDESIHCSSEALPSDASCPKLRNDSDKVDSQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3777 1198 MobiDBLite consensus disorder prediction 847 874 - -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 167 184 - -
Dere01g3777 1198 Pfam DIRP 690 791 IPR033471 -
Dere01g3777 1198 ProSiteProfiles SANT domain profile. 93 130 IPR017884 -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 539 580 - -
Dere01g3777 1198 ProSiteProfiles Myb-like domain profile. 96 136 IPR001005 -
Dere01g3777 1198 SUPERFAMILY Homeodomain-like 93 140 IPR009057 -
Dere01g3777 1198 Coils Coil 931 968 - -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 844 874 - -
Dere01g3777 1198 Gene3D - 46 150 - -
Dere01g3777 1198 PANTHER LIN-9 52 1198 IPR010561 GO:0006351|GO:0017053
Dere01g3777 1198 SMART DIRP_2 691 792 IPR033471 -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 1093 1107 - -
Dere01g3777 1198 Coils Coil 743 763 - -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 167 207 - -
Dere01g3777 1198 SMART sant 94 142 IPR001005 -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 1093 1121 - -
Dere01g3777 1198 CDD SANT 98 132 IPR001005 -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 406 427 - -
Dere01g3777 1198 MobiDBLite consensus disorder prediction 553 567 - -
Dere01g3777 1198 FunFam Protein ALWAYS EARLY 3 isoform A 54 150 - -
Dere01g3777 1198 Pfam Myb-like DNA-binding domain 96 132 IPR001005 -
Dere01g3777 1198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 132 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3777 Dere-ChrDere01 51947491 51964344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere01g3777 DIRP 1.8e-31 No_clan