Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3773 ATGGAGGATGAGCGATTGCTGCCGATTGCAAACGTGGGTAAAATCATGAAGCAAATACTTCCTGCAAGTGCGAAGATCTCAAAAGAAGGGAAACAAGTAATGCAAGAATGTGCAACGGAGTTCATAAGCTTTGTGACAGGGGAGGCATCTGACAAGTGTCAGAAGGAGAATCGCAAGACCGTCAATGGGGATGACATCTGTTGGGCTCTGAGTGCCTTAGGGTTTGATAACTATGCTGAGGCCATAGCAAGGTATTTGCATAAATACAGGCAAGCTGAAAGGGACAGAGCCAATCAGAAAAACAAAGCTCAAAACCCGCAAACTCAGCACTTGTTTGAAGATTTTTCAGCAACACTATCAAGCTCACAAAGCAAGAAGCAGAAAACTGAAATTTGTGCTGCAATAGAATCTAGGGCTTCTGATGAGATGGCTTCTGCAAATCGATCTCGCTGA 453 0.4415 MEDERLLPIANVGKIMKQILPASAKISKEGKQVMQECATEFISFVTGEASDKCQKENRKTVNGDDICWALSALGFDNYAEAIARYLHKYRQAERDRANQKNKAQNPQTQHLFEDFSATLSSSQSKKQKTEICAAIESRASDEMASANRSR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3773 150 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Dere01g3773 150 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Dere01g3773 150 PRINTS CCAAT-binding transcription factor subunit A signature 34 52 - -
Dere01g3773 150 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Dere01g3773 150 MobiDBLite consensus disorder prediction 101 127 - -
Dere01g3773 150 Gene3D Histone, subunit A 1 148 IPR009072 GO:0046982
Dere01g3773 150 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 70 IPR003958 -
Dere01g3773 150 MobiDBLite consensus disorder prediction 93 127 - -
Dere01g3773 150 Coils Coil 75 102 - -
Dere01g3773 150 ProSitePatterns NF-YB/HAP3 subunit signature. 37 53 IPR003956 GO:0005634|GO:0006355|GO:0043565
Dere01g3773 150 SUPERFAMILY Histone-fold 3 108 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3773 Dere-ChrDere01 51916408 51916860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3773 1 105 CCAAT-HAP3 Transcription Factor Family AT1G09030 73.585 6.40e-55 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dere01g3773 CBFD_NFYB_HMF 9.6e-25 CL0012