Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3747 ATGCCGCCTGTCTTCCCCTTCGGCAGCTCTATTTCTGTTTTTGCTAGCGAGGCCATAAAAATGAGTCGAGGAGGTGCAGCTGCTCCTAAGGGAAGAAAAAAGGGGGCTACTTTCACCATTGATTGTTCCAAGCCAGTGGAGGACAAGATCATGGACATTGCATCTCTGGAAAAGTTTCTTCAAGAGAGGATCAAAGTTGGTGGCAAGGCTGGTGCTCTTGGTGATACTGTTACTGTTGCCCGTGAGAAGAGCAAGATCATTGTTACCTCTGACAGTAACTTCTCTAAACGGTACTTGAAGTATTTGACGAAGAAATATTTGAAGAAACACAACGTGAGAGACTGGCTCAGAGTGATTGCTGCTAACAAAGATAGAAGTGTTTATGAACTGAGGTACTTCAACATCGCTGAGAACGAGGGAGAGGATGAAGATTAA 435 0.446 MPPVFPFGSSISVFASEAIKMSRGGAAAPKGRKKGATFTIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVAREKSKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRSVYELRYFNIAENEGEDED 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3747 144 PANTHER 60S RIBOSOMAL PROTEIN L22 16 143 IPR002671 GO:0003735|GO:0005840|GO:0006412
Dere01g3747 144 Pfam Ribosomal L22e protein family 34 142 IPR002671 GO:0003735|GO:0005840|GO:0006412
Dere01g3747 144 FunFam 60S ribosomal protein L22-2 25 144 - -
Dere01g3747 144 Gene3D - 26 144 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3747 Dere-ChrDere01 51673240 51677753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3747 21 144 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.290 2.38e-67 198