Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3740 ATGTGCCTTTTGTGTGCCCTGACCAATACAAAGCTTTTGTGGTTTCCTGTTACATGTTACAACTTTGTACTTGAAGAGTCTTGGATTTTATCGAACTTGGTTGAGGCGTCGTTCAAGAGCAGAGGGAGCTCGTCTTCACCCAGAGCCGCAATGGGGATCGATCTTAAGGCTGGTGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAATGATATCTACCTCAAGCTCTTGGTCAAGCTTTATCGATTCCTTGTCCGGAGAACTGGCAGCAATTTCAATGCTGTTATACTCAAGCGCTTGTTCATGAGTAAGGTTAACAAGCCTCCACTTTCTCTCTCAAGGTTGATAAAGTTTATGAATGGGAAGGAAGATAAGATTGCTGTTATTGTGGGTACGGTGACTGATGATATTAGAACATATGAAGTCCCACCCTTGAAAGTTACAGCACTCAGGTTTACTGAGACAGCACGAGCCAGAATAGAAAAGGCAGGTGGTGAGTGCTTGACGTTTGATCAGCTTGCCCTTAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGGGGTCCAAAGAATGCTCGTGAAGCTGTGAAGCATTTTGGTCCTGCTCCTGGTGTACCACACAGCCACACAAAGCCTTATGTGCGATCTAAGGGAAGGAAATTCGAAAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGGGTTTGA 714 0.4594 MCLLCALTNTKLLWFPVTCYNFVLEESWILSNLVEASFKSRGSSSSPRAAMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKFMNGKEDKIAVIVGTVTDDIRTYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3740 237 Gene3D - 51 237 - -
Dere01g3740 237 PANTHER 60S RIBOSOMAL PROTEIN L18 51 237 IPR000039 GO:0003735|GO:0005840|GO:0006412
Dere01g3740 237 Pfam Ribosomal protein 60S L18 and 50S L18e 52 237 IPR021131 -
Dere01g3740 237 SUPERFAMILY Ribosomal proteins L15p and L18e 70 189 IPR036227 -
Dere01g3740 237 FunFam 60S ribosomal protein L18 51 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3740 Dere-ChrDere01 51591685 51596055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3740 53 237 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 2.34e-103 295