Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3722 ATGGGGCATTTCTCATCCATGTTCAATGGCTTGGCAAGGTCGTTCTCCATAAAGAAAGCGAGGAGCTCTGGGAGATGCGATGGGAGAGAAGCTGCTGAAGCAATGGCCAAAGAAGCTAAGAAAAATGACTTGATTCTCTGCTCTCCTGGCACTGTTAATGTGGATGGTTCCAGCAACTTCGCCTCAGTTTTTTCCAAAAGAGGCCAGAAAGGAGTCAACCAGGATTGCTACATAGTTTGGGAGGAATTTGGATGCCAAGAGGACATGATGTTCTGTGGGATATTCGATGGGCATGGACCATGGGGTCACTTCGTGGCCAAAAGAGTAAGAGAGTCAATGGCTCCATCTTTGCTATGCAACTGGCAGGAGACACTTGCTCAAACCTCGCTTGATCCAGATATTGACATAGAGGTCCAGAAAAAACTTCACCGTTTCAATTTATGGAAGCACTCCTACCTGAAAACCTGTGCTGCCATTGATCACGAGCTAGAGCAGCATCGCAAAATTGATTCTTTTTACAGCGGAACCACTGCTCTCTCCATTGTTCGACAGGGGGAGCTCATTGTTGTAGCAAATGTTGGAGACTCTCGTGCTGTGTTAGCTACAACTTCAGACGATGGAAGTGTGGTACCAGTTCAGCTTACTGTTGATTTCAAGCCCAATTTGCCTCAGGAGGCAGAGCGTATAATTCAGTGTCAGGGGCGAGTGTTCTGCTTACAAGACGAGCCCGGAGTTCACAGAGTGTGGCTACCTGATGGTGAATCACCAGGACTAGCCATGTCTAGAGCTTTCGGAGACTACTGCGTCAAGGACTATGGTCTTATTTCTGTTCCTGAGGTCACACACAGGAATATAACCTGTAGAGACCAGTTTGTTGTGCTAGCAACAGATGGGGTGTGGGATGTGATATCCAATGAAGAAGCAGTAGATATAGTGTGTTCTACAGAAGACAGAGCGAAGTCAGCTAAGAGATTGGTGGAGTGTGCGGCGCGTGCATGGAAACGCAAGAGGCGAGGCATTGCCATGGACGACATATCTGCAATTTGTCTCTTCTTTCACCCTTCTGCTTCGTCTCTGCAAGTTACCCAAGTTGCCAACCTAAAATAG 1107 0.4743 MGHFSSMFNGLARSFSIKKARSSGRCDGREAAEAMAKEAKKNDLILCSPGTVNVDGSSNFASVFSKRGQKGVNQDCYIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKRVRESMAPSLLCNWQETLAQTSLDPDIDIEVQKKLHRFNLWKHSYLKTCAAIDHELEQHRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDDGSVVPVQLTVDFKPNLPQEAERIIQCQGRVFCLQDEPGVHRVWLPDGESPGLAMSRAFGDYCVKDYGLISVPEVTHRNITCRDQFVVLATDGVWDVISNEEAVDIVCSTEDRAKSAKRLVECAARAWKRKRRGIAMDDISAICLFFHPSASSLQVTQVANLK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3722 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Dere01g3722 368 Gene3D - 53 354 IPR036457 -
Dere01g3722 368 SMART PP2C_4 51 350 IPR001932 -
Dere01g3722 368 Pfam Protein phosphatase 2C 86 326 IPR001932 -
Dere01g3722 368 SUPERFAMILY PP2C-like 52 353 IPR036457 -
Dere01g3722 368 PANTHER PROTEIN PHOSPHATASE 41 350 IPR015655 GO:0004722|GO:0006470
Dere01g3722 368 CDD PP2Cc 59 352 IPR001932 -
Dere01g3722 368 FunFam Probable protein phosphatase 2C 34 51 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3722 Dere-ChrDere01 51452272 51453727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3722 1 353 PP2C-type Phosphatase Gene Family AT3G05640 74.157 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3722 01 51452272 51453727 Dere01g3722 01 51452272 51453727 ECH