Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3712 ATGGGGACAGAACAGGTGTTGCCATTCTCGGTGTTATCTGTTGTTGAAGATGTTCTTCAACAGCATGGGACCCGATTGAGCGACACCAACTTGCCGTCAAGGAAGCGTGAACCAGCTTGCTTAAGAAGGTATGAAGCAGCTGGTTGGCTGCGGAAGACAATTGGAATCATTGGAGGCAAAGAGTTTCCAGCTGAGCCGTCTGAAGAAGAATTCAGGATTGGCTTGCGTAGTGGCATAATCCTTTGCAATGTTCTTAACAAAATTCAACCTGGAGTGGTGGCCAAGGTAATTGAAGGTCCCTGCGATTCTGATGATGGGGCAGCAGCATTGTCTGCATTTCAATATTTTGAAAATGTTAGGAATTGTCTTGTAGCTTTGCAGGAACTGGGGCTTCCAACCTTTCAAGCTTCTGACTTGGACGAGGGAGGGAAATCTGCGAGGTTAGTGGATTGTGTTTTGGCAATAAAGGCATATAGTGAATGGAAAGATGGAGGAAAACAGGGGTCATGGAAACATGGTGGGAATTTAAAGCCACCCGTTTCTGGAAGACCATTTTTGCGCAAAAACTCAGAACAATTCATCAACACTTTAACGAGGACCACGAGTGAGAAAGATGGATGGACAAGTGATCAATCTACATGCAGTGATCCCGGGCATGATCGATCTGAAGGGGGTTCAGTTCATAATTTGAATGCACTACTTCGGGAATATTTGTTCGATAAGAAGCCTGAAGAAATTATCACCGTAGTGGAGTCCCTTATTGGCAAAGTCACGGAGGAGTTTGAACGTCGCGTGCTAATCCAACATGAAATGTCGACAACAAATGCAGGAGATAAGGCGGCGGAATCTGAAACAGAGAATGCAGTTTCAAAAGTTGCTTCTGATGACGAAGTTTCAGAAGTTGCTTCTGATGATGAAGAGATTATCAGGACGGAAGAAAAGGAAGATGTACAGCATAAAGAAGATGACTGTTGCTATGAAAAGGACAGCAGCGATGAAGAATCTAGAATCCAGGTTTCGAAGAAGCGGCAAATCCAGAAGAATCAAGAATTTTATGATGACAAGCACAGCAGAGGTGAAGAAACAAGAATCCAGGTTTCGAAGAAGCAGCAAAATTTGGTATCCCAACAACACAAAGAAATCCAGGAATTGAAAATTATCGTCCATCATACGAAATCAGGAATGCAATCTTTACAGAAGCAATACCAGGAGGAGCTTATCTTTTTGAGTAAGCACGTGCAAAGCCTAGCTTCTGCTGCATCAGGATATAGGAGAGTTCTTGAAGAAAACCGCAAGCTATACAATCAACTGCAGGATCTGAAAGGAAATATTAGGGTATACTGCCGAGTTCGACCCTTCTTTGGGCAAGTAAACAATGCTGGCTCTGTTGGTAGCATAGAGGAAGGAAGCATCTCAATGATAATTCCTTCCAAGTACGGAAAAGAGGGGAGGAAAACATTTAATTTCAACAGAGTGTTTGGTCCTACTGCAACTCAAGCTGAGGTTTTTGCAGACATGCAGCCACTTATTCGTTCGGTTCTGGATGGCTATAATGTCTGCATATTTGCTTATGGCCAGACAGGTTCAGGAAAGACCCATACTATGTCTGGACCAAACGAGCTTACTGAGGAAACTGTGGGTGTAAACTACAGGGCACTGAGAGATCTTTTCCTACTGTCACAGCAGAGGAAAGACACCATTGCCTATGACATCGGTGTTCAGATGCTTGAGATCTACAATGACCAAGTCAGAGATCTTCTAGCGACAGATGAAATTCGCAACAGTTCCCAAAATGGCATCAACGTACCAGAAGCAAACCTCGTTCCTGTTTCGTCAACTTCCGATGTCTTAAATTTGATGAACTTGGGACAAAAGAATCGAGCAGTTAGTGCGACTGCTATGAATGACCGGAGTAGTCGTTCTCATAGTTGCCTGACAGTTCATATTCAAGGAAGGGACCATACATCAGGAAGCCATCTTCGCGGCAGTATGCATCTAGTTGACCTGGCAGGAAGTGAGAGGGTTGATAAATCCGAGGTCACAGGCGATAGACTTAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCATTAGGAGATGTCATTTCTTCGCTGGCCAATAAGCAAGCGCATGTTCCCTACAGGAACAGTAGACTTACTCAACTGCTTCAAGATTCTCTTGGAGGGCAAGCCAAGACACTCATGTTTGTACATATTAGTCCAGAGCCTGATGCTCTTGTGGAAACACTTAGCACACTCAAGTTTGCGGAACGGGTCTCCACAGTTGAACTTGGCGCAGCACGAGCTAACAAGGAGAGTTCAGAAGTGAAAGAGCTCAAAGAACAGATTGCTAATTTAAAGGCAGCTTTAGCAAGGAGGGAGGGAGAAGATGAGCCACTTCAACATTCTGTAACTGGTAGCCCAGATATATCAAAATTGAAATCTTACAAGTCTTCTCCTACACGATCTAATTGGGCGTCTGTAGGTCCTAGGCAACCCAAAGATGATTCTAGTAGCGTAGAGAGCCGGACCAACGGTGCAACGAAGCTGAAAAGACGAAGCTTAGATCCCCAAGACATGATCATGCATTCACCTCCCTGGCCACCTGCAGGCAGTCAGAGGCTGAACAGAAAGGAAGACGACAAGGAATCAATTTCTGGGGACTGGGTTGATAAGATCGTGGTTAACAGGAATGACAGCTTGACAAGTGATGATAGCCTAGTGGGTCAGTGGGAAGCAGAAAGCAAACAGTCTTCTCCAATGCTGAGTCCTAGTTATCTTTCAGACCCTTCAAAAATATGCTTGGAAAATTCCTTTAAAGTTACATTGCAGAAAAAGGATAGCCCAGACTATGACTTGGCCACGACAGATGACTCTGATGATCAGCTTGAGGTTGCTACTAGTGATTCTTCAGAATCGGACTTGCATTGGCAATTACATATGCCTAAACCAATCAGCAAACCCAGTGGGACTGTTTCTAAAGTAAAGAAACCAACTCCAATCAGACTAGCAAAGACCCCAGAAAATAGGAGCATGATTCCGTCTTTGATTCCTGCCCCATCAAGGAAACAATCAATGAGTCAACCCAGAAAGCAGGCAAGTCCGCTTGATGGAAAAAGGAGAATTGGTAATCCAAAGTGA 3141 0.4429 MGTEQVLPFSVLSVVEDVLQQHGTRLSDTNLPSRKREPACLRRYEAAGWLRKTIGIIGGKEFPAEPSEEEFRIGLRSGIILCNVLNKIQPGVVAKVIEGPCDSDDGAAALSAFQYFENVRNCLVALQELGLPTFQASDLDEGGKSARLVDCVLAIKAYSEWKDGGKQGSWKHGGNLKPPVSGRPFLRKNSEQFINTLTRTTSEKDGWTSDQSTCSDPGHDRSEGGSVHNLNALLREYLFDKKPEEIITVVESLIGKVTEEFERRVLIQHEMSTTNAGDKAAESETENAVSKVASDDEVSEVASDDEEIIRTEEKEDVQHKEDDCCYEKDSSDEESRIQVSKKRQIQKNQEFYDDKHSRGEETRIQVSKKQQNLVSQQHKEIQELKIIVHHTKSGMQSLQKQYQEELIFLSKHVQSLASAASGYRRVLEENRKLYNQLQDLKGNIRVYCRVRPFFGQVNNAGSVGSIEEGSISMIIPSKYGKEGRKTFNFNRVFGPTATQAEVFADMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNELTEETVGVNYRALRDLFLLSQQRKDTIAYDIGVQMLEIYNDQVRDLLATDEIRNSSQNGINVPEANLVPVSSTSDVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHIQGRDHTSGSHLRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLANKQAHVPYRNSRLTQLLQDSLGGQAKTLMFVHISPEPDALVETLSTLKFAERVSTVELGAARANKESSEVKELKEQIANLKAALARREGEDEPLQHSVTGSPDISKLKSYKSSPTRSNWASVGPRQPKDDSSSVESRTNGATKLKRRSLDPQDMIMHSPPWPPAGSQRLNRKEDDKESISGDWVDKIVVNRNDSLTSDDSLVGQWEAESKQSSPMLSPSYLSDPSKICLENSFKVTLQKKDSPDYDLATTDDSDDQLEVATSDSSESDLHWQLHMPKPISKPSGTVSKVKKPTPIRLAKTPENRSMIPSLIPAPSRKQSMSQPRKQASPLDGKRRIGNPK 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3712 1046 Pfam Kinesin motor domain 472 761 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 MobiDBLite consensus disorder prediction 1018 1032 - -
Dere01g3712 1046 MobiDBLite consensus disorder prediction 201 219 - -
Dere01g3712 1046 Coils Coil 423 443 - -
Dere01g3712 1046 CDD KISc_C_terminal 441 764 - -
Dere01g3712 1046 ProSitePatterns Kinesin motor domain signature. 662 673 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere01g3712 1046 Gene3D - 34 160 IPR036872 -
Dere01g3712 1046 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
Dere01g3712 1046 SMART ch_5 42 158 IPR001715 GO:0005515
Dere01g3712 1046 ProSiteProfiles Kinesin motor domain profile. 443 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 PRINTS Kinesin heavy chain signature 632 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 PRINTS Kinesin heavy chain signature 663 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 PRINTS Kinesin heavy chain signature 516 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 SUPERFAMILY Calponin-homology domain, CH-domain 44 172 IPR036872 -
Dere01g3712 1046 MobiDBLite consensus disorder prediction 304 365 - -
Dere01g3712 1046 CDD CH_AtKIN14-like 42 157 - -
Dere01g3712 1046 Gene3D Kinesin motor domain 438 803 IPR036961 -
Dere01g3712 1046 ProSiteProfiles Calponin homology (CH) domain profile. 40 160 IPR001715 GO:0005515
Dere01g3712 1046 MobiDBLite consensus disorder prediction 273 371 - -
Dere01g3712 1046 FunFam Kinesin-like protein KIN-14I isoform A 438 804 - -
Dere01g3712 1046 MobiDBLite consensus disorder prediction 792 885 - -
Dere01g3712 1046 MobiDBLite consensus disorder prediction 201 226 - -
Dere01g3712 1046 SMART kinesin_4 441 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3712 1046 MobiDBLite consensus disorder prediction 945 1046 - -
Dere01g3712 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 794 IPR027417 -
Dere01g3712 1046 Coils Coil 769 796 - -
Dere01g3712 1046 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 947 IPR027640 GO:0003777|GO:0007018
Dere01g3712 1046 MobiDBLite consensus disorder prediction 804 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3712 Dere-ChrDere01 51362578 51368289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3712 431 800 Calmodulin-binding Proteins AT5G65930 40.420 1.71e-74 267