Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3706 ATGGCATCATCGAAAAGGCAATCTCACGACGACGATCATGACAGGGATGGTCAAGCTCCTGGTAATGAGTCCAAGAGGAGACAAGGCAACTCTAAACAAGCACTGATTCGCTTTGGTCAGGGGATCAATGCACAGCAGTTGACTGACATGATTGTCAGAGGAGTTCGAAAAGTGGTACAAGAGGAGTTTTTACCTAGACTGGAGCGACACCTACGTCCACGAGGAGAAAGCCTTAATCAGACAGGAACATCAGGAGGAAGAGGCAGAACTTTCCAACTGCGTTTTACTAAGGGATTGCCTCGTGAGATTTTTACAAACTCCAAGGTTCTGGCCGAGGACATGAGTCATCTTGAAATTGTTGTGTGCCAGTGTGATGCTGGATCTCAAGACTGTATAGTCAGAGATGGTCCTCTGTCCTCGATAACGGTAGAGCTGTGCGTTTTAGACAGTAAGTTGGGTTCCAATAGCACTAAGGATTGGACTGCAGAGGAATTCAGGCACAGCATATTGCGCGAAACAAGAAAACGTGGGGAATTACTCAGTGGAGACAGATTCATAAAACTGACAAGTGGAGTTGGTTGTATCCCTAAAGTTTGTATCAACGATATCTCGAAATGGGCTCACAACGGCAAGTTCAGATTAGGGGCCAGAGTCGTTGAACCAATTTCAGGTGAAGCAAACATAAGGGAAGCTATAAGTGAACCTTTGAGAGTCAAGGATATCCGTGGAGAGTCGTACAAGAAACCCGAAATTGCATCGTTGAGTGACGAGATTTGGCGTTTGAAAACGATAGCAAAAGGTGGGAAAAGACATAAGCAACTGGCTTCTCATGGAATAGTAACTGTCAAGGATCTGTTGCTGTTGCTTAATACCAACCCAGATCTACTAAAAAAGATAATTGGTAAAAGTGGAAAGGGGACATGGGAAAAGCTTATCAAACATGCTCAAACTTGTGCCTTACAAGATGGTGGTAATTGTTCCACCTATCACACGACAGAACAACCAATTGCTAGCCAACCTTATCTTCCTGTAGGATCTCTAGACTCGGAACCCAAGCATTTGGTGGAGACAGCTGAACATTGTACTTACATGAATTCACAAGCTGTGGGAGCCCTGCAACGTGACTTCCGAGCTGATCACCAAGAATTCAGTGTCCCGTCCACCTCAACATCGCATGTCGGTGAAGTTGGACATAACGGATATCCCGAATTGCCAATGTGGGAGTTCCCTGACTGGTTTGATGCAAACCTTTGGGATCTCTTGGGCCATCCCTCTGGTGATGAAGGACAGTGTAGCAGCCATAATCCTAACCCCAATTCTGCTGCGTATATATCAAGCAAACGGAAAGGCACAACAGTTTGGGATAAGATTCGAAATACTCTCAAAGTGGCCATGCTCTATATATATCGAGCTAAAAGGAAGGCAAAGCTTGTCCCCCATAACTGTTAA 1449 0.4513 MASSKRQSHDDDHDRDGQAPGNESKRRQGNSKQALIRFGQGINAQQLTDMIVRGVRKVVQEEFLPRLERHLRPRGESLNQTGTSGGRGRTFQLRFTKGLPREIFTNSKVLAEDMSHLEIVVCQCDAGSQDCIVRDGPLSSITVELCVLDSKLGSNSTKDWTAEEFRHSILRETRKRGELLSGDRFIKLTSGVGCIPKVCINDISKWAHNGKFRLGARVVEPISGEANIREAISEPLRVKDIRGESYKKPEIASLSDEIWRLKTIAKGGKRHKQLASHGIVTVKDLLLLLNTNPDLLKKIIGKSGKGTWEKLIKHAQTCALQDGGNCSTYHTTEQPIASQPYLPVGSLDSEPKHLVETAEHCTYMNSQAVGALQRDFRADHQEFSVPSTSTSHVGEVGHNGYPELPMWEFPDWFDANLWDLLGHPSGDEGQCSSHNPNPNSAAYISSKRKGTTVWDKIRNTLKVAMLYIYRAKRKAKLVPHNC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3706 482 MobiDBLite consensus disorder prediction 1 31 - -
Dere01g3706 482 MobiDBLite consensus disorder prediction 1 22 - -
Dere01g3706 482 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Dere01g3706 482 PANTHER OS02G0177800 PROTEIN 26 333 IPR012416 GO:0005516
Dere01g3706 482 Pfam Calmodulin binding protein-like N-terminal domain 91 240 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3706 Dere-ChrDere01 51330896 51333523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3706 55 412 Calmodulin-binding Proteins AT4G25800 30.688 3.18e-43 159