Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3705 ATGCTCACTCTCCCTCTCTGGGCCGGGCTCTGCATATCAAGGAAACTAATGATTGAGCACGATTACGACAATCGTAGTCTCTCCTTTTCTGGGTTGGGTACCACTGTTCTCTGGCCTTGGAAATATCATAAACGGACTCTGATGAATGACCTGAATTCCTACTTGGAACCTTTCCTGCGAAGAGTGGTACGGGAAGAGGTGGAGCGTAAAATCCAAGAACTTTTATTTCCGAGAGCAACGGTTAATCAAGGTGGCACATCTGGTGCCAAAACCTTACAGTTGCGTTTTATCAATAAATTGCCAGAGACAATATTTACACTCTCTAATGTTATAGCTGAGGACGAGGAGACTCCAGTTCAAATTGCTCTTTTTGATGTTAGATCTGAATCTGTAGTGAGCAGTGGGCCTCTGTCCTCTATAAAGGTAGAGATCTGTGCCCTCAACGGTGACTTCTGTTCCAACGGGTGTGAAGATTGGACTGAAGAGGAATTCAATGCCAACATCCTTCGCCAAAGGAAGGGTAAGGAGCCATTACTGAATGGAGATAGGTTCATTAATCTTAAAGGCGGAGTTGGTTGTATCACAAAAATTAAGTTCACCGATAACTCGTGCTGGATGAGAAGCCGTAAGTTTGGTTTGGGAGCCAAAGTTGTGCAATCAACTTCCTTTGAAGTAAGCATCAAGGAAGGTAAAAGTCAACCTTTTATGGTCAAAGATAACAGAGGAGAGCTGTACAAGAAACACCACCCTCCATCATTGAATGATGATATATGGCGGTTGGAGAGGATAGCCAAAGATGGTAAAATCCACAAGCGACTATCTCTCCATGGAATAAACACTGTCAAGGATCTTTTGCAGTTATATATCATCAACCCATCTTCATTGCTTGAGAAAGTTGGCAACATTAGAAAGAAGTCATGGGAGGCAATTACTGAACATGCGAAGGATTGCGTTATAAATGATTACAACCTTTACATGTATCACACAGCAGAACAACCAATAGGCCTGCTTTTCAATTCCATTTACATCCTTGTGGGCGTGACGTTTGATGGGCTAAATTATTGTTCTCCAGATACTCTCACCCCAAATGAGAGGCATTTGGTGGACATGGTGAAGCAGCACGCCTACAAAAATGTGCATAATTTGAAATCAGTTGATGAGACATCATTGAATTTTCAGATGCCATTAACATGCCTACAAGCTCCGCAGGCTAGTGCTCCACATCAAGGTCTCCAACAGCTTAATTTCCCAAATGCACAGCAAGGTCAAATTGAAACATGGCCAGATTCTGGTCAATCATTCACTTCAACTTCATATGTTAATGAAGGAATGCACAATGACCAAATATATGCTAATCCGTCAGCAATGTTACAAAATAGTTCAACAGAAGGAGAATTATTCGCCGGAATGTATATTGAAGGGAATAATTGGCCCCATAGTAGCTCACATTGGACAAAGAATGAAAACCCACATATTCAATTTACAAATTCGGGTCAAGAAAATGGCTTATACTGTGAGTCATATGGTGGAGTAGAATTTAACAAGCATTCTAATGAGGCCATATCAATCAGTGAGAAACCCAAAGCAGCGTGGTATAAGATTCGTACTGCTCTCAAATGGGTCATATCAGTAAGAAGGGATGTTGCTAACAAAAGGATGGCAAAGCTGATTTACTATAACTACTAG 1686 0.414 MLTLPLWAGLCISRKLMIEHDYDNRSLSFSGLGTTVLWPWKYHKRTLMNDLNSYLEPFLRRVVREEVERKIQELLFPRATVNQGGTSGAKTLQLRFINKLPETIFTLSNVIAEDEETPVQIALFDVRSESVVSSGPLSSIKVEICALNGDFCSNGCEDWTEEEFNANILRQRKGKEPLLNGDRFINLKGGVGCITKIKFTDNSCWMRSRKFGLGAKVVQSTSFEVSIKEGKSQPFMVKDNRGELYKKHHPPSLNDDIWRLERIAKDGKIHKRLSLHGINTVKDLLQLYIINPSSLLEKVGNIRKKSWEAITEHAKDCVINDYNLYMYHTAEQPIGLLFNSIYILVGVTFDGLNYCSPDTLTPNERHLVDMVKQHAYKNVHNLKSVDETSLNFQMPLTCLQAPQASAPHQGLQQLNFPNAQQGQIETWPDSGQSFTSTSYVNEGMHNDQIYANPSAMLQNSSTEGELFAGMYIEGNNWPHSSSHWTKNENPHIQFTNSGQENGLYCESYGGVEFNKHSNEAISISEKPKAAWYKIRTALKWVISVRRDVANKRMAKLIYYNY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3705 561 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Dere01g3705 561 Pfam Calmodulin binding protein C-terminal domain 324 384 IPR046829 -
Dere01g3705 561 Pfam Calmodulin binding protein-like N-terminal domain 92 240 IPR046831 -
Dere01g3705 561 PANTHER OS02G0177800 PROTEIN 46 478 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3705 Dere-ChrDere01 51321983 51326446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3705 48 552 Calmodulin-binding Proteins AT4G25800 33.746 1.68e-86 278