Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3702 ATGCATATTCGGTGGCGAAGGCACTGTGTATTTATAGTGGGAAAGAGACTACTGGAATTCTACCTCTTAGTAGTTTCAATGAACCCAATGCGTCACAACTTATGGATGCCATTATTGGTGTCGCATTCATGCCAGTTCGATGCACTCTCAGAGCTTAGGAATACTTCATGGGCTAACCATTCAGATATTAAAATGGAGATCGAGAAAAGACGTTCCAGGGGAAGCTTCCTCAGCTTTTTTTATTGGAATGGAGTATCTCGAAAGAAGCTGTTCTATGCCAATCCTAACTTACCTGAAGATTTAAAGCAAGCAAAAGGAAATGTGGAGAACAAGCCAAAGTCACAGTTGAAAAGGGTGAGAAGTTCACTTTTTCTTTGTAAAACCTTTTTCATTTTTGTGGATGTGATATTGGAATTTGCGGTTGTTCATTGGTTGCCACTGTTTCAGACACAGGTGGGTGAGAATGGAATAAAGCCAAGCAATATTAGCAGTTGTGATTTCAACAGTGAGCTATTAGTTCGTAGTGATGGAGGTTGTGAGACTAAACCACCTGGCTTAGTAGCGAGGCTAATGGGTTTGGATTCATTGCCAACGTCAACAGTCACTAGGCTCTCTTCTACTGCATTACATGCCTCTAACTCTCTTGGATCTTCTCATTGTCATGAGGTTGCTCTCGACTGCATAGAATCAAGGGTGCGAAACAGGACAAATAAGAGATTTCAAAGTGAAATCTTGCCTCAAAATTTAGCGAGACCAATTCAACTGTTGTCCCCAATTATCCCACCGAAGAATGCACTGTCATCATCAGCTGCCTCTTCTATCCCCTTGAGAATTCTTGGTTTGGAACAGAAATCAGAAGCTGCATGTTATGCACCCACGCTTGAGGAGTTTGTAAATACCAACCCTGTCAAGGGTTCAAGAGATTCAGAAAAAATTAGTCCTCACCATTATGGGAGTAAAGGAAAATCAACTCTACTTGCAACACAGGCCAAGGCCGATGTTCAAAGCAGAGATACATTGACTTCAAATGGTAACAGGGGATATAAGCAGAAAGAACATAATAAGACATCATCCAAGCAGTTATTCAGGACCCACAAACCAATTTTACAGCAAGTTGTGAAGCAGAAAACTTGTACAAAGCATAATAGCAATGCCAATGAGCTTGGGCAGAGTAGTGTTACCAACAAAGGCAGATTAAATTCAATAGTAGATTCCAAAAAGCTGACTACGCGAAGTTCCACTGGTGGAGCAAGGAAGACAACAGACAAGGGCTCTGTAATTGCTAACGTTGGACCTAAATGTTCTGGCAGAAGAGCAAATGATGTGAAAAAGGAATTTCCATTATCTAAAACAAAGAGCAATTCCAAAAAGAAAAGGTATACCGCCAGGGATGTTCTTCTTCTTCCTGACAATGATGTTAATAATTATGAAAGTAAGTCCAGAAAATGCAATATACCAACTGATTGGAGTATGAATCGGGATGCATCAGACAAGAAAGCAAGCAAGGACGTTATTTCCTTTACGTTTACATCTCCTTTGAGGAAAGAGTCACAAACACAATCCTCTACTCATGTAAACAACGTTGATGTCAATCCTCCTGGGTTACATATGATAGATGGCGATGCTTTGAGTGTCCTGTCCGAGAGAAAGGTGCAAGAATTGACATCTAGAACCAACTCACCTCAATGTACTCTGGCTACTGGGGGGTTTTCTGCCGTTTTAGGATTTAGTGAGGTTAGCACCAAATCTAGGGACGGAGACAGAAGCAGTCACTCCGATCTAAATGGTGGTAAGTTGCACAGCATGAACCAGCACCACTATGGTTGTTCTTCAAGCGATGGTCTGATGCTTAACATGAATCTGCAGCTGCAGGGATCAAAAGCAATGGCTGAGCATAGCTGCTTCAGCAACATTGAAACTCAATATGATCAAGGTTTGGACATTCCTTCTGTCAGTGAAGGCAGTGGAGTTTGCTTTTGCATTCAAGATGAGGAATCCAATGAGCAGAGTTCATGCACATTGGTGGAGGACATGGCTGCCCAACAATTATGTGGACTATCAAACATGTTAGATTATAATAGATCAAGGAACTATGTGAAGGATATACTTAGCAATGCAGAGTTAATGGAAGAAAATTATGCATTGGACCAAACAAATACAAACAAGGTTCTCAAGACAAATGTGTTTGATATGTTGGAGAAACGGAGCAATGGAACAGAAAGCAATGGAGAAGAGTACTCAAAGCTGGGGAAGAATCTTTTGTTAGACTGTGTGGGTGAGTGCCTGCAATTTAGAAGAAGCAGGCAAACTTTAATTGGAAGCTACAAGGCATGGCCAGTTCAGACTATGACTTGGTTGGCCGAAGATTTGTACAGAGAAATTTTGGGTCATAAAAGCATGCTAGAGCTCATGGTTGATGAGCTTGTCTACGAAGACATGAGCTCTCCACATGGCACGTGGCTCCATTTTCAGACTGAGGCCTTCGAACAAGTCTTGGAGATTGAGTGGGACATCTCAACTTCTTTGATCAATGACTTGATTTCTGATTTGTTACTTCTTTAA 2562 0.4137 MHIRWRRHCVFIVGKRLLEFYLLVVSMNPMRHNLWMPLLVSHSCQFDALSELRNTSWANHSDIKMEIEKRRSRGSFLSFFYWNGVSRKKLFYANPNLPEDLKQAKGNVENKPKSQLKRVRSSLFLCKTFFIFVDVILEFAVVHWLPLFQTQVGENGIKPSNISSCDFNSELLVRSDGGCETKPPGLVARLMGLDSLPTSTVTRLSSTALHASNSLGSSHCHEVALDCIESRVRNRTNKRFQSEILPQNLARPIQLLSPIIPPKNALSSSAASSIPLRILGLEQKSEAACYAPTLEEFVNTNPVKGSRDSEKISPHHYGSKGKSTLLATQAKADVQSRDTLTSNGNRGYKQKEHNKTSSKQLFRTHKPILQQVVKQKTCTKHNSNANELGQSSVTNKGRLNSIVDSKKLTTRSSTGGARKTTDKGSVIANVGPKCSGRRANDVKKEFPLSKTKSNSKKKRYTARDVLLLPDNDVNNYESKSRKCNIPTDWSMNRDASDKKASKDVISFTFTSPLRKESQTQSSTHVNNVDVNPPGLHMIDGDALSVLSERKVQELTSRTNSPQCTLATGGFSAVLGFSEVSTKSRDGDRSSHSDLNGGKLHSMNQHHYGCSSSDGLMLNMNLQLQGSKAMAEHSCFSNIETQYDQGLDIPSVSEGSGVCFCIQDEESNEQSSCTLVEDMAAQQLCGLSNMLDYNRSRNYVKDILSNAELMEENYALDQTNTNKVLKTNVFDMLEKRSNGTESNGEEYSKLGKNLLLDCVGECLQFRRSRQTLIGSYKAWPVQTMTWLAEDLYREILGHKSMLELMVDELVYEDMSSPHGTWLHFQTEAFEQVLEIEWDISTSLINDLISDLLLL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3702 853 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 65 116 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 301 358 - -
Dere01g3702 853 Pfam Domain of unknown function (DUF4378) 697 845 IPR025486 -
Dere01g3702 853 MobiDBLite consensus disorder prediction 380 420 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 437 457 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 380 457 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 513 533 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 322 347 - -
Dere01g3702 853 MobiDBLite consensus disorder prediction 513 529 - -
Dere01g3702 853 Pfam DUF761-associated sequence motif 176 201 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3702 Dere-ChrDere01 51309870 51313655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3702 67 851 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.669 2.80e-51 191