Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3698 ATGTATTCATTTATTTGCTCCAATTCTGCTCTGAGGTCGTTAGTGTTGACAACACTTTCAGAAGAAAATTTGATCGACTGGAGTATTTGGAACGAGCTAGGCAGCGTGAGAGGCAGGTCCTCCGGTGCAGAGGAAACCCTTAAATATAGAGACTTTGAAGTCGACCTGGAATCCCGTTTGGGGAAGACTCAGGCTGGATATTACTGCTCAGTTTATCAAAGGGCTTTGGGCATATCTATGCGAGTAGAACGTGCTTCTCTTAAACAGGTTCAGGAACGATTTGAAGTTCTTAAGAAACGTAAAGCTCTTGGCAGCTTCACGGTGCAAGTTCTTGATGATCGGATTTTAAACCAGCAACAAGAAGAGGAAGAAAGAAAGCGACAGCGTCGAGAGAGGAAAAAGGAAAAGAAGTTGCCTGAAAATCTACTGGTGGAATTGAGTATAGCCCTTTTCATAAGTAACCCGAAAGAATTGGATTTCAGCTCTGAAGTTCCTAAAATATGTAGTCCAAAAAGTCGAAGATGTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCGTGCTTGGTATGGTCCGGGATTGCACATTAGGACATGGCTGCGAAAGTCTAAAGTAA 654 0.4465 MYSFICSNSALRSLVLTTLSEENLIDWSIWNELGSVRGRSSGAEETLKYRDFEVDLESRLGKTQAGYYCSVYQRALGISMRVERASLKQVQERFEVLKKRKALGSFTVQVLDDRILNQQQEEEERKRQRRERKKEKKLPENLLVELSIALFISNPKELDFSSEVPKICSPKSRRCGDAGYRSPYLSHAKRALYHLSYIPVLGMVRDCTLGHGCESLK 217
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3698 217 Coils Coil 116 138 - -
Dere01g3698 217 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 72 140 IPR040107 GO:0000398|GO:0005681
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g3698 Dere-ChrDere01 51292406 51296413 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3698 47 109 C2H2 Transcription Factor Family AT3G05760 54.839 5.52e-23 89.0