Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3685 ATGGCTTCAGCTAGTGGAATGGCTAGTGGTGATTCCATGAATGTTGATAAACTTCTTGATGAGATCAATGAAATGAATATCAAGGATGACAATGAAATGGAGACAACAACGGTAGATGGAAATAGAACTGAAACTGGTCACGTCATTACCATAAGTTACATGGCTGAGCGTGTTGTTGGACAAGGCTCATTTGGTATTGTGTTTCAGACCAAGTGTCTTGAAACTAGAGAAACTGTAGCAATCAAGAAGGTTTTGCAGGATAGAAGATACAAGAACCGTGAACTGCAAACAATGTACCTTCTTGATCATCCTAATGTCATGTTACTCAAACACTACTTCTTTTCCACCACAGACAAGGATGAGCTCTATCTCAATTTGATTTGCAGAGCTTTGGCTTATATTCATGGATGTGTTGGAGTGTGCCACAGGGATATTAAACCTCAGAACCTATTAGTTAATCCCCACACTCATCAGGTTAGGCTTTGTGATTTTGGAAGTGTAAAAGTTCTGCCTATATTCCTTGGGGAAAGTGGAGTTAACCAACTTGTTGAGATTATCAAGGTACTTGGAACACCGACTCATGAGGAAATAAAATGCAGGAATCCAAATTGTATAGAGTTTGAGTTCCCAAAAATCAAGGCTTAG 645 0.3922 MASASGMASGDSMNVDKLLDEINEMNIKDDNEMETTTVDGNRTETGHVITISYMAERVVGQGSFGIVFQTKCLETRETVAIKKVLQDRRYKNRELQTMYLLDHPNVMLLKHYFFSTTDKDELYLNLICRALAYIHGCVGVCHRDIKPQNLLVNPHTHQVRLCDFGSVKVLPIFLGESGVNQLVEIIKVLGTPTHEEIKCRNPNCIEFEFPKIKA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3685 214 Pfam Protein kinase domain 122 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3685 214 Gene3D Phosphorylase Kinase; domain 1 37 127 - -
Dere01g3685 214 FunFam Glycogen synthase kinase-3 beta 35 134 - -
Dere01g3685 214 SMART serkin_6 53 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3685 214 Gene3D Transferase(Phosphotransferase) domain 1 128 205 - -
Dere01g3685 214 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 127 170 - -
Dere01g3685 214 ProSitePatterns Protein kinases ATP-binding region signature. 59 83 IPR017441 GO:0005524
Dere01g3685 214 ProSiteProfiles Protein kinase domain profile. 53 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3685 214 SUPERFAMILY Protein kinase-like (PK-like) 45 191 IPR011009 -
Dere01g3685 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3685 Dere-ChrDere01 51123065 51126998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3685 44 165 CBL-interacting serine-threonine protein kinases AT5G01810 31.818 1.09e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dere01g3685 Pkinase 3.5e-13 CL0016