Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3678 ATGGTGTGCCAGGAAGATTTGCTGATTGAAAAAATCTGCGAGCTGTATGATAAAATTTCGAGCCTAGAGAGTCTCAAACCCTGCGAGAATGTCGACACTCTTTTCACCCAACTCGTCCTCACATGCATACCACCTAGCCCCGTCGATGTCACCAAGCTCTCCAAAAAAGTGCAAAACATTAGATCCAAACTCATTAGGCTGTGTGGCGAAGCCGAAGGGCTTCTAGAGAGCCACTACTCCACCATCCTAGGCTCCTACGAAAACCCACTCGATCACCTCCATATCTTCCCCTATTACTCCAACTACCTCAAGCTTGGCCTCCTTGAGTTCACCATCCTTAGCCAGCACTGCACCCGTGTGCCTGCCAACATAGCCTTCGTGGGCTCAGGTCCCCTTCCCTTCACTTCTATCGTATTGGCTTCGAATCACCTCCCGACCACCACGTTCCACAACTATGACCTCGACCCGCGGGCCAATTCCATGGCTCTCCGCTTGTTCTCTTCTGATCATCATTTGTCAAAGCGTATGGTTTTCCACACCAGCGATATTTTGGATGTGACCAAGGCTTTGGAGGACTACGAGGTTGTTTATTTGGCGGCCCTCGTCGGGATGGACAAGGAGGAGAAGAATCGGATTATTGATCACTTGGCTAAGTATATGGCTCCAGGAGCTCTTCTGATGCTGAGGAGTGCGCATGGCGCTCGGGCTTTTCTGTACCCTGTGATTGAGCCTTGCGATCTTCGAGGCTTCGAGGTGCTCTCTGTGTTTCATCCAACAGATGAGGTTATCAATTCTGTTGTCATAGCACGTAAATACCCCCTGCCTCTACACTCCCACGATCAGCAAGGTCTTGGAAATATGATATTGCCAAACAAGTGTTCTGAGATCCAAGTGTTTAATCCCCTCATCAACCATGGGAATATGATTGAGGAGTTGGCCATTGAGGAGCAATTATCGTAA 960 0.4917 MVCQEDLLIEKICELYDKISSLESLKPCENVDTLFTQLVLTCIPPSPVDVTKLSKKVQNIRSKLIRLCGEAEGLLESHYSTILGSYENPLDHLHIFPYYSNYLKLGLLEFTILSQHCTRVPANIAFVGSGPLPFTSIVLASNHLPTTTFHNYDLDPRANSMALRLFSSDHHLSKRMVFHTSDILDVTKALEDYEVVYLAALVGMDKEEKNRIIDHLAKYMAPGALLMLRSAHGARAFLYPVIEPCDLRGFEVLSVFHPTDEVINSVVIARKYPLPLHSHDQQGLGNMILPNKCSEIQVFNPLINHGNMIEELAIEEQLS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3678 319 Gene3D Vaccinia Virus protein VP39 5 273 IPR029063 -
Dere01g3678 319 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Dere01g3678 319 PANTHER NICOTIANAMINE SYNTHASE 3 4 314 IPR004298 GO:0030410|GO:0030418
Dere01g3678 319 Pfam Nicotianamine synthase protein 5 272 IPR004298 GO:0030410|GO:0030418
Dere01g3678 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 259 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3678 Dere-ChrDere01 51023076 51024035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3678 1 315 Nicotianamine Synthase Gene Family AT5G04950 59.375 2.32e-136 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3678 01 51023076 51024035 Dere01g3678 01 51023076 51024035 ECH