Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3673 ATGAAACTGCTTCCTCGACCTATAGTCTTCCCTCTTTTTGTGCTCACACTCAGTTGCTCTTTCTGGGTTGATAGAGCAGTGGATTGTGGCGGGAAGAAGATTGCAAATACCATCATTGTTGGTCGATCTGGGGGGTTCAAAACGGTTCAAGCAGCAATTGATTCCATCAAGAGCAACAATGCTGAATGGGTCAAAATTCACATATGTGCTGGCACATACAAAGAGAAGGTCCAGATTCCTGATGACAAACCATGTATCATCTTGGAAGGCGAAGGCAGAGGCGTTACGACAATCACATACGATGACCACCAACATACAGACACAAGCGCCACATTCTCTTCTGATCCAGACAATGTGGTTGCCATGGGCATCACCTTCGAGAACTCGTACAATCTGGGAGCAGAATTAGATTTGTCCCGGAACACATCGGCAGACTCATTCACTCCGGCATTGGCGGCGAGAATATACGGAGACAAATCTGCCTTTTTCGACTGTGGTTTCTTGGGTTTTCAAGATACACTTTGGGACGTAGAGGGTCGTCATTACTTCAAAAAGTGCTATCTTGAGGGTGCTGTAGACTTCATCTTTGGCAACGGCCAGTCCTATTACGAGAATTGTGTGTTGAACGCGACGTTAAGGACATCTAGTGCAGAGGTTACGTTTGGTTATGTAACAGCTCAAGGTCGCCATTCACAGAAGGAGGCGAGTGGTTTTGTATTCAGAGAGGGTTTTGTGGTGGGGGAGGGAGAAGTAATGCTAGGGAGAGCCTACGGTGCTTACTCCACAGTGATATTTCACGGAACGTATTTGGATTCGGTGGTAGCTCCTCAAGGATGGGATGCTTGGGATTACAAAGGCCAAGAGGCTAATATGATGTACGCGGAAGTTGAGTGTAAAGGGCCAGGGGCGAATGCTGGGAAGCGCGTGCCATGGGAGAAGAAGCTCAGTGCTTCACAGCTAACCCAATTTTCGATACCATCCTTTATAGACCAAGATGGGTGGCTTGCCAATATACCATGA 1020 0.4735 MKLLPRPIVFPLFVLTLSCSFWVDRAVDCGGKKIANTIIVGRSGGFKTVQAAIDSIKSNNAEWVKIHICAGTYKEKVQIPDDKPCIILEGEGRGVTTITYDDHQHTDTSATFSSDPDNVVAMGITFENSYNLGAELDLSRNTSADSFTPALAARIYGDKSAFFDCGFLGFQDTLWDVEGRHYFKKCYLEGAVDFIFGNGQSYYENCVLNATLRTSSAEVTFGYVTAQGRHSQKEASGFVFREGFVVGEGEVMLGRAYGAYSTVIFHGTYLDSVVAPQGWDAWDYKGQEANMMYAEVECKGPGANAGKRVPWEKKLSASQLTQFSIPSFIDQDGWLANIP 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3673 339 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Dere01g3673 339 FunFam Pectinesterase 32 339 - -
Dere01g3673 339 Gene3D - 31 338 IPR012334 -
Dere01g3673 339 Pfam Pectinesterase 42 331 IPR000070 GO:0030599|GO:0042545
Dere01g3673 339 SUPERFAMILY Pectin lyase-like 35 335 IPR011050 -
Dere01g3673 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 336 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g3673 Dere-ChrDere01 50985122 50986537 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3673 28 288 Carbohydrate Esterase AT2G19150 46.388 1.08e-75 233