Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3671 ATGAAAAATAATTTTAATACCATATTGAAAACCATGTTGGGAAGCAACGAGGCACCTCTAATGTTGCTTGTCTTATACGCATTACTCTTATCTCATCAGAAACCATACCGGAAATTGAACCAGGCCATGGCAGAAATAGTGTGTATCAATAATGCAGAGTATGCACAGAACATGTTCAAATTAACAAATCGCTCAATTGAAGCACAAAGAAGGGCGTGTGAGGAATCGCTGTTTCTGCTTCTATACATGGCGTCTTTGGAACTAAACATGGATTCCAGTACTTCCGATACGTTGCAAGAATCCAATCAGAAAAAGCGCAGGAAAATAGCGGACGATGCCAACCATCAGAATTCTCTCAACCAGATTCGATGGAGATCCGAGGCAGAGCAGCGGATCTACTCCTCCAAGCTCGTCGAAGCTCTCCGCCACGTCCTCCGTCGGAATCCTTCTCCGACGGCCAGGCCTAACGGCGGTCGTGAAATTCGTGAGACCGCCTACCGAGTTCTAGCCGCGACGGCCAAGGGAAGAACTCGGTGGAGTCGAGCAATTCTGGCGACTCCACTCAGCCGTTGGAAATTCCAGAGGCACCACAAGAAGGTGAAGAAGGCGACGAAAGGATTGAAGAAACCGATGATTGCGAAAGACAGAAGGAGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCGGCCGGTTAGTTCCCGGTTGCCAGAAGATCTCGTTTCCGAATCTTCTGGAAGAAACCACTGATTATATATCGGCCTTGGAGATGCAAGTCCGAACCATGACGGCACTCACCGAACTGCTCACCGGTGGTGGCGCGCCGGCCGATCGGCTCGGGTGGGCTTGA 849 0.5006 MKNNFNTILKTMLGSNEAPLMLLVLYALLLSHQKPYRKLNQAMAEIVCINNAEYAQNMFKLTNRSIEAQRRACEESLFLLLYMASLELNMDSSTSDTLQESNQKKRRKIADDANHQNSLNQIRWRSEAEQRIYSSKLVEALRHVLRRNPSPTARPNGGREIRETAYRVLAATAKGRTRWSRAILATPLSRWKFQRHHKKVKKATKGLKKPMIAKDRRRLPAVQKKARVLGRLVPGCQKISFPNLLEETTDYISALEMQVRTMTALTELLTGGGAPADRLGWA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3671 282 MobiDBLite consensus disorder prediction 93 114 - -
Dere01g3671 282 CDD bHLH_AtIBH1_like 214 266 IPR044549 GO:0006355
Dere01g3671 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 255 IPR011598 GO:0046983
Dere01g3671 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 271 IPR036638 GO:0046983
Dere01g3671 282 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 125 269 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3671 Dere-ChrDere01 50934021 50939230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3671 100 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.000 5.37e-39 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3671 01 50934021 50939230 Dere02g0025 02 244587 245180 CCT
Dere01g3671 01 50934021 50939230 Dere02g0025 02 244587 245180 ECH
Dere01g3671 01 50934021 50939230 Dere01g3671 01 50934021 50939230 ECH