Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3668 ATGTTCGACGGAGTAAACCCTTGCATTGAGCCGATGTCCGACGACAATGGCTGCACAGACCAATATGGTGTCCTACTCTATTACAAGTATGCTCAAATTCCTCACCTTAACGACCTCTTCACATTCTACAACTCTAACTGCTCCTCCCTTGGCCTCCTTGGTCGCGTTCGTCTCTCTTCCCACGGCGTCAATGTCACTGTTGGTGGCAAATTATCCTCCCTAGAGAGACACATTGAAGCGGTCAAGAGTAATAGCTTATTTGAAGGAACTGATTTCAAGCTTGCCACTTGTCATCAGCCACTAAATGACAAGATTGCAAAGGAATGCGGATTTACTTCTCTCTCAGTTCGAATTGTCAAGGAACTGGTCACTCTTAGTTCTCATCCCTTACTAAAATCGCCAGAAATTTCAAATGCTGGAAGACATCTCTCTGCAGTTGAGTTTCATTCTGTCCTCCAGAATGTGGACAAGGAGAATCCAGCAGACAGCCTTGTTTTACTCGATGCGAGGAATCTATATGAGACAAGAATTGGGAAATTTCATGCACCTGACATTAAAACTTTGGATCCCCAAGTCAGACAGTATAGTGATATGCCATCATGGATAGATGGTAATCATGATCAATTGAAAGGGAAACAAATTCTCATGTATTGTACTGGTGGAATCAGATGTGAAATGGCATCTGCATATATCAGGTCAAAAGGTTTGGGCTTTGAGAATGTGTTTCAGCTATTTGGTGGGATACAACGATATTTGGAGCAATTTCCAGATGGTGGTTTCTTCAAAGGAAAGAATTTTGTTTTTGATCACCGCATATCTGTCACAAGCTCAGATGCGAATGTTATTGGAACATGCCTTATTTGTGGATGTTCATTTGATGATTACTCTTCACGCTGCCGATGTACCTATTGCAGAATGCTTGTTTTGGTCTGTAGTAACTGCCAGAATGAAGCTGCTGTCTATGTTTGTGAATTATGCCAAAAACAGGGCAAGGCTGTAAGGATGATGCAGTTAAATGAAATCAGTGAATCCAAAACAGTGTTGCCAGATGTTGAGTTACAAGTTGTTTCCTCAGATTCTATTTTCCCACCTCAGATGCCTCAGAGAGATGGTGTCAGGTCTTCAAAAAAACTTAAAATCTTATGCTTGCATGGATTTCGGCAAAATGCATCCAGTTTTAAAGGAAGAACAGCATCGTTAGCAAAAAAACTGAAGAAAATTGCTGACTTAGTTTTTATAGATGCACCTCATGAGTTGCCATATATTTATCAAAACCCCGTGCAGGGGGATCATATAAATTCTGTATCTTCTTCGTTGCCCTTAAGTCCTCCTCCCCCTTGGGAGAACTGCAAGAAGAAATTTGCATGGTTTGTGGCACCCAACTTTGATGGAGGGAGTAAATCTGATTGGAAGGTAGCAGATGGCCCATTTGATCCGCTTCAATACCAGCAGCAAACTGACGGATATGATACTTCACTAGCTCATTTGAAGGCTGTGTTTTCTCAAGAAGGGCCTTTTGATGGAATATTGGGATTTTCACAGGGAGCTGCAATGGCTGCATTGATCTCTGCACAACAGGAGAAGCTAAGAGGTGAAATGGACTTTAGATTTGTAATATTGTGCTCAGGCTTTGTTGTCCATATAAAGGTGACGGACTCTGGCTTGATCAAATGCCCTTCTCTTCACATTTTTGGTGATGACCATGGTAAAGACAGGCAGATAGCGAACCATGCTAGCAAGGAGCTTGCTTCTCTGTATGATGAAGGTTGTTCGGTGATTGTTAAACATGATTGTGGTCATATAATTCCTACTCGGTCTCCGTATATCGATGAGATCAAGGACTTCCTAAGTCGATTTCTGTAA 1863 0.4181 MFDGVNPCIEPMSDDNGCTDQYGVLLYYKYAQIPHLNDLFTFYNSNCSSLGLLGRVRLSSHGVNVTVGGKLSSLERHIEAVKSNSLFEGTDFKLATCHQPLNDKIAKECGFTSLSVRIVKELVTLSSHPLLKSPEISNAGRHLSAVEFHSVLQNVDKENPADSLVLLDARNLYETRIGKFHAPDIKTLDPQVRQYSDMPSWIDGNHDQLKGKQILMYCTGGIRCEMASAYIRSKGLGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVTSSDANVIGTCLICGCSFDDYSSRCRCTYCRMLVLVCSNCQNEAAVYVCELCQKQGKAVRMMQLNEISESKTVLPDVELQVVSSDSIFPPQMPQRDGVRSSKKLKILCLHGFRQNASSFKGRTASLAKKLKKIADLVFIDAPHELPYIYQNPVQGDHINSVSSSLPLSPPPPWENCKKKFAWFVAPNFDGGSKSDWKVADGPFDPLQYQQQTDGYDTSLAHLKAVFSQEGPFDGILGFSQGAAMAALISAQQEKLRGEMDFRFVILCSGFVVHIKVTDSGLIKCPSLHIFGDDHGKDRQIANHASKELASLYDEGCSVIVKHDCGHIIPTRSPYIDEIKDFLSRFL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3668 620 SMART rhod_4 150 257 IPR001763 -
Dere01g3668 620 Pfam Rhodanase C-terminal 262 327 IPR022111 -
Dere01g3668 620 Gene3D - 132 285 IPR036873 -
Dere01g3668 620 Pfam Serine hydrolase (FSH1) 375 611 IPR005645 -
Dere01g3668 620 ProSiteProfiles Rhodanese domain profile. 160 260 IPR001763 -
Dere01g3668 620 SUPERFAMILY alpha/beta-Hydrolases 375 620 IPR029058 -
Dere01g3668 620 Pfam UPF0176 acylphosphatase like domain 23 121 IPR040503 -
Dere01g3668 620 Gene3D - 12 123 - -
Dere01g3668 620 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 130 288 - -
Dere01g3668 620 Gene3D alpha/beta hydrolase 374 620 IPR029058 -
Dere01g3668 620 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 19 619 IPR020936 -
Dere01g3668 620 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 126 275 IPR036873 -
Dere01g3668 620 FunFam Rhodanese-like domain-containing protein 6 13 123 - -
Dere01g3668 620 FunFam esterase OVCA2 isoform X6 374 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3668 Dere-ChrDere01 50917264 50922513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3668 20 620 Sulfurtransferasese or Rhodanese AT1G09280 62.023 0.0 777