Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3658 ATGGTTAGTTGGTGGTTGTTGCTTAAATTCTTGACTGTCATAATGCCACGTATCCTCGGAGTCACGAGTCCTGACTCGGATCTCCTGTTTAAATGCGAGACTGAGTCGGTTCTGGAGCGAAACCTCTCATCGTTGTCTGAAAGAGGGAAAAAGAAGAGCATGGGTGCGCATGGCAATTCAGAGCCTACGATCGAGATCAATGATCTGAGATTCACATACCCTGGGATCGATGGTCATCCTCCTCCGGGTTCCGTTCCTCTTATCCAAGATTTATCCCTTACCCTCAATTCCGGCGACCGGTGCCTTCTTGTTGGATCTAATGGCGCTGGCAAGACCACCATCCTTAAGATCTTAGGAGGGAAGCACATGGTGGAACCAGGTATGGTTCGTGTACTTGGAAGATCAGCTTTTCATGACACCACTTTGGTATCCTCTGGTGATCTGAGCTATCTTGGTGGAGAGTGGAGGCGAGATGTTGCTTTTGCAGGGTTTGAGGTTCCAATACAAATGGATATTTCAGCAGAAAAACTGATATTTGGGGTAGGTGGGATTGATCCAGGAAGAAGAGCAGAGCTATTGAAGGTATTAGATATCAATCTTTCCTGGAGGATGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTTCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTTGATGAGATAACAGTGGACCTTGATGTTCTAGCAAGGGCTGACCTTCTGAAGTTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACAATTATCTACGCAACGCATATATTTGACGGTCTTGAGAATTGGCCTACACATATAGTTTATGTAGCCCATGGAAAGCTGCAACTAGCAATGCCTATGGACAAAGTCAAAGACATTAGCAAATTGTCACTGATGAGAACAGTTGAAAGTTGGCTGAGGAAAGAACGAGATGAAGACAGGAAGAAAAGGAAAGAGAGGAAGGCAAAAGGTCTTCCTGAATTTGAAAAGCAAGTTGAGGGAAGCCGAGTGACAGGGGATCCAGCTCGGGTGATGAATAATGGGTGGGCGGCAGGGCGACTAAATCCCACCATTGCTGGTGAGGAGAACTTCCTCCTAAGCTCAAACAGAGTACTGAGGCAGTAG 1137 0.4573 MVSWWLLLKFLTVIMPRILGVTSPDSDLLFKCETESVLERNLSSLSERGKKKSMGAHGNSEPTIEINDLRFTYPGIDGHPPPGSVPLIQDLSLTLNSGDRCLLVGSNGAGKTTILKILGGKHMVEPGMVRVLGRSAFHDTTLVSSGDLSYLGGEWRRDVAFAGFEVPIQMDISAEKLIFGVGGIDPGRRAELLKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPTHIVYVAHGKLQLAMPMDKVKDISKLSLMRTVESWLRKERDEDRKKRKERKAKGLPEFEKQVEGSRVTGDPARVMNNGWAAGRLNPTIAGEENFLLSSNRVLRQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3658 378 SMART AAA_5 97 284 IPR003593 GO:0016887
Dere01g3658 378 MobiDBLite consensus disorder prediction 313 344 - -
Dere01g3658 378 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 307 IPR003439 GO:0005524
Dere01g3658 378 Pfam ABC transporter 89 234 IPR003439 GO:0005524
Dere01g3658 378 MobiDBLite consensus disorder prediction 313 340 - -
Dere01g3658 378 Gene3D - 33 327 IPR027417 -
Dere01g3658 378 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 63 310 - -
Dere01g3658 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3658 Dere-ChrDere01 50833137 50836684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3658 64 280 Calmodulin-binding Proteins AT2G36910 22.944 2.56e-08 54.3