Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3656 ATGGCGAGCGGCCTCATTCTATTTCTAGCCATGGCTTTTGTGCAACTGGGGTATGCCGGCTTGAATATCACCTCAAAGCTTGCAATCCAATCTGGCATGAACCCCGTTGTGCTTGCTGCTTATCGCCAAATCTTCGCCACAATTTCCATTGCTCCCATTGCTTATTTCTTGGAACGCAAAACGGTTCCGAGGTTGACAATGCCCATTATGTTCCAGATATTACTTTCTTCCTTAACTGGGGTTACAGGAAACCAAGTGTTGTTCTTCTTGGGGCTGAAGTATTCAACCGCTACAATTGCATGTGCAATGACAAATTTACTCCCAGCTTTCACTATTATCCTTGCACTCATCTTCAGGCAAGAGAATCTCAAAATAAAGACGTGGAGTGGGCAGGCAAAGATGGTAGGGACTGTATTGTGCGTGGGTGGAGCCTTGCTCTTATCATTCTACCATGGAAAAATCCTTGGCATAGGTGAATCAAAGATTCACTGGGGATACGCAGAGAGAATGGACGCAACAAGCTCCTCCACCAAAACAAACATGTTTCTAGGCCCTTTCTTCTTAATCGCTAGTACTCTTGTTTGGGCCGTGTGGTTCATCATCCAAGCAGACATGGGAAAGAATTTTGCTGCTCCTTATACAAGCACAGCCTGCATGTGCTTCTTGGCAAGCTTCCAGTGTGTGGCCATTGCTTTGTGTTTTGAACATACCGCCTCGGCTTGGTCTCTCGCCAATACTATGCGACTCACTTCTGCTCTTTATTCGGGAGTTATTTGCAGTGGTGTAGCGTATAGCCTCATGTCGTGGACTATTGAGAGGAAAGGTCCTCTTTATGTCTCTGTGTTCACCCCCTTGCAGCTTGTCATGACTGCAGTTGTCAGCTGGGCTCTGCTTCGTGAGAAACTATACGTTGGAACCGCTATAGGGTCGTTCCTTATAGTTATTGGACTGTATGCAACACTGTGGGGGAAGAACAAAGAAATGGTTAAGAAAGATGGGATTCAAGACATAGAAGCAATGGCGGAGAGGGAGAAGGACGCGAAGAATGATTTGAAGTTGCAGTCCTACGTGGCTTCTTCAAATGAGAGGCAGGAGAAGAAGCAAGCAACATTGCAGATGGGAAATGCAGATGCTGCCTAA 1140 0.4623 MASGLILFLAMAFVQLGYAGLNITSKLAIQSGMNPVVLAAYRQIFATISIAPIAYFLERKTVPRLTMPIMFQILLSSLTGVTGNQVLFFLGLKYSTATIACAMTNLLPAFTIILALIFRQENLKIKTWSGQAKMVGTVLCVGGALLLSFYHGKILGIGESKIHWGYAERMDATSSSTKTNMFLGPFFLIASTLVWAVWFIIQADMGKNFAAPYTSTACMCFLASFQCVAIALCFEHTASAWSLANTMRLTSALYSGVICSGVAYSLMSWTIERKGPLYVSVFTPLQLVMTAVVSWALLREKLYVGTAIGSFLIVIGLYATLWGKNKEMVKKDGIQDIEAMAEREKDAKNDLKLQSYVASSNERQEKKQATLQMGNADAA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3656 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Dere01g3656 379 Coils Coil 334 354 - -
Dere01g3656 379 PANTHER WAT1-RELATED PROTEIN 8 338 IPR030184 GO:0016020|GO:0022857
Dere01g3656 379 MobiDBLite consensus disorder prediction 358 379 - -
Dere01g3656 379 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Dere01g3656 379 Pfam EamA-like transporter family 3 148 IPR000620 GO:0016020
Dere01g3656 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3656 Dere-ChrDere01 50825532 50828157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3656 3 355 Nodulin-like Gene Family AT1G09380 56.667 7.74e-147 419