Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3642 ATGGTTGTAACACTCTGGATTCGGATGCTTGCAGGCACCAAGGGCTCCGAGAAAATGGGTGCTGATCTTAACGCTGAATTATCTAAGAAAATTCCCATTTTTGGTCTTAAAGTTTGGCAAGTGATTGGAATTGCAGTTGGATTATTTATAGTTGCTATCCTCTTCCTCTCTATTTGCCTTACTTCACGGAAGAAATCAAGAAAATCCAAGGACAAGATTCCCCTCAGTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCAGCAAATGGATTTGTTCCTCGTGATGGAATACTTCTCACAATACATGATAAATCCAGTGACAAAGAATCTGACAAAGTCATGGTTCATTTGGGTGTGGGGAAGATGAAGAATGGGGATAATAATAGCAGTTATTCGGATTCATTTAATCACTTAGAGAAAGATGGAGGCGGGTCACAGTCAGGAGAAGAAGGGAGCTCTGGCACTGTTACAGTGTATAAGCACTCCTCTTCATACCCTATAACAGCTCCTTCCCCCCTCTCTGGCCTCCCGGAGTTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTAAGGGATCTTGAACTTGCTACAAACCGGTTTTCAAAAGATAATGTGATTGGTGAGGGTGGCTATGGAGTTGTTTATCGGGGGCAGTTGATCAATGGGAGTCCAGTGGCAGTTAAAAAGATACTTAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTCGAAGCTATTGGCCATGTACGACATAAAAATTTGGTTCGCCTTTTAGGGTACTGTATTGAGGGGACTCACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTTCATGGAGCTATGCGTCATCATGGGTATCTTACATGGGAAGCGCGTATGAAGATTCTTCTTGGCACGGCTAAAGCTCTTGCATATTTGCATGAAGCGATTGAGCCGAAGGTGGTGCACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGCTGCTGGGCGCCGGGAAGAGTCATGTCACAACACGAGTCATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAATACTGGCCTTTTGAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAAGCAATTACTGGAAGAGATCCAGTTGACTATGGCCGTCCAACTCATGAAGTTAATCTAATTGATTGGCTGAAGATGATGGTTGGAAGCAGGCGATCCGAAGAAGTGGTAGACCCGAATATTGAGGTGAAGCCGTCAACCAGAGCTTTAAAACGAGCCCTCTTGACTGCTTTGAGATGTGTAGATCCAGATTCTGAAAAAAGACCCAAGATGGGCCAAGTCGTACGGATGCTTGAGTCTCATGAGTACCCTTTACCTAGAGAGGATCGAAGGCACCGAAGAAATCAAGAGGATAGCGTGGAAATTGAATCCCAGAAGGAATATTCTGACACAGATAGATCAGAGAGCAGAGGGTAA 1557 0.4367 MVVTLWIRMLAGTKGSEKMGADLNAELSKKIPIFGLKVWQVIGIAVGLFIVAILFLSICLTSRKKSRKSKDKIPLSQIPTVSKEIKEVRVEQVSANGFVPRDGILLTIHDKSSDKESDKVMVHLGVGKMKNGDNNSSYSDSFNHLEKDGGGSQSGEEGSSGTVTVYKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGSPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLIDWLKMMVGSRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLPREDRRHRRNQEDSVEIESQKEYSDTDRSESRG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3642 518 CDD STKc_IRAK 213 479 - -
Dere01g3642 518 SUPERFAMILY Protein kinase-like (PK-like) 191 489 IPR011009 -
Dere01g3642 518 Gene3D Phosphorylase Kinase; domain 1 189 282 - -
Dere01g3642 518 FunFam Putative receptor-like serine/threonine-protein kinase 283 494 - -
Dere01g3642 518 PANTHER OS01G0323000 PROTEIN 22 509 - -
Dere01g3642 518 SMART serkin_6 207 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3642 518 FunFam Putative receptor-like protein kinase 189 282 - -
Dere01g3642 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Dere01g3642 518 MobiDBLite consensus disorder prediction 131 162 - -
Dere01g3642 518 ProSitePatterns Protein kinases ATP-binding region signature. 213 236 IPR017441 GO:0005524
Dere01g3642 518 Gene3D Transferase(Phosphotransferase) domain 1 283 495 - -
Dere01g3642 518 MobiDBLite consensus disorder prediction 477 518 - -
Dere01g3642 518 ProSiteProfiles Protein kinase domain profile. 207 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3642 518 Pfam Protein kinase domain 208 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3642 Dere-ChrDere01 50705691 50708833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3642 184 480 Trihelix Transcription Factor Family AT1G70460 50.000 3.77e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere01g3642 Pkinase 3.9e-48 CL0016