Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3638 ATGGGCGGAGGTGGAACGACGCACGCGGAGGCGCAGTACTCCTCGGCGAAGATTTCGGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCGCCCAGAACATTACCTCGGCGCTGGTTCAGATGAGCTATTGTGGGCCCGTTTCCATCTCCGCCTACGGTGATACTACTCGCATCACGGCCTCTGTACAGCACGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCAGCTGGCGTTAAAGATGCTAGCGACAAAAAGATTCTTGTTGACATGCTGTTTTGGGCTGTGGATAATCCTGCACCTGCTAATTATTTATTAATTTCTGGTGACCGAGACTTCTCTAACGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTTGCACAGCCTCAGAAAGCATCTGCGCCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATGGCGAATCACAACAATTTGGTAATAATGGCCACCTATCAAGTTCAGACACCTTACAAATCCCCGTCTCTAGTCCCGTACAGACAAAGCCACAAAGAGATTCCTTTTCTGAAGTTCATGTAGGAAATCATAAGTTTCCAAACGCAGGAAGAGGGTTAGATTCTAGATACCAGGGGAAAACAACTTGGAGAAACCCAAGTCAACCAAATGGACCCAGAGCTTTGAACCCGCCGGTTGGACTTCAAGAAAATCATAGCAATATAAACTCTTATTGTCCTGGCAACTACAGCCCGAATATCCCCCCAAGTAGATCTGCTCCAAATTTTGTACGTGGCAGTCCTGATCAGCTATGGAGCAATAGCGGCAATCTGCCAGGCAATTCTCAGATTCCTTATTCACGGCCATTAAGACCCAACAGTTATCCACTGCAACCTGCTTTTGCACCAATCAATCAATATCCAACTAATTCCCAATCTTTTGCAACTTCAGTAGTGCCTCCTAGGACTGGGGGGCCCAACTTCACCTCAGGACCACTTACAAGTGTGCCAGATATAGGTAATCTGAACATTTCTGGATTGACAAAACAGAATCCTAACAATAATGCTCCACATCCTGTAAGGTCAGTTGACGAACGAAATGGACATATGTTACATAGCACACAACAACTATACCGTGTTCACTCTCATGGTCCAGAATATCCCCCTACATCTGTGGCAGCAATGGGTAATAATAACCCTCCTGGTGTTGGCTTGTGGGGATCTCCAGGATGCCCTAAACCTTCTGAATATGTACAAGGGCTCATAGGGGTTGTTTTACTTGCCTTGAACACACTAAAAAATGAAAAGATAATGCCAACTGAGGCAAATATAGCTGATTGTATCCATTATGGAGACCCCAAACACCGCAACACTGATGTAAAGAAGGCTTTGGAGAGTGCTATTGAACAGCAGATGGTGATCAAACAGAATTTAGGTGCTTTGCAGTTGTATATTGGTAAGAATGATAAACTATGGAAGTGTGTAAACCCTATTGGTGGCAATCCCAGTCAGTACTCAAAAGAAACATGGGACGAAATCCAAAAATTTTTAACTACTCCTTCTGGAAGATTGGCTATAATGGGTACTCAATGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAGATGTTGCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATTGCTCATAAAAAATGGATCATTCATCGTCAGTCAGGTTGGCAACCAATCATCATTACTCTACCTCAGGCGAATTCTGATTTAGGTGTCACAGGTGACATAAATGCATCCTAA 1836 0.4466 MGGGGTTHAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNITSALVQMSYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQFGNNGHLSSSDTLQIPVSSPVQTKPQRDSFSEVHVGNHKFPNAGRGLDSRYQGKTTWRNPSQPNGPRALNPPVGLQENHSNINSYCPGNYSPNIPPSRSAPNFVRGSPDQLWSNSGNLPGNSQIPYSRPLRPNSYPLQPAFAPINQYPTNSQSFATSVVPPRTGGPNFTSGPLTSVPDIGNLNISGLTKQNPNNNAPHPVRSVDERNGHMLHSTQQLYRVHSHGPEYPPTSVAAMGNNNPPGVGLWGSPGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANIADCIHYGDPKHRNTDVKKALESAIEQQMVIKQNLGALQLYIGKNDKLWKCVNPIGGNPSQYSKETWDEIQKFLTTPSGRLAIMGTQCKYEAGTVIKNMCLKDVALGDVLQILNMVIAHKKWIIHRQSGWQPIIITLPQANSDLGVTGDINAS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3638 611 MobiDBLite consensus disorder prediction 249 304 - -
Dere01g3638 611 MobiDBLite consensus disorder prediction 169 372 - -
Dere01g3638 611 Pfam NYN domain 17 153 IPR021139 GO:0004540
Dere01g3638 611 MobiDBLite consensus disorder prediction 169 205 - -
Dere01g3638 611 Pfam OST-HTH Associated domain 545 600 IPR025677 -
Dere01g3638 611 PANTHER LIMKAIN B LKAP 13 486 IPR024768 GO:0005777|GO:0010468
Dere01g3638 611 Gene3D - 9 160 - -
Dere01g3638 611 CDD PIN_limkain_b1_N_like 17 141 - -
Dere01g3638 611 MobiDBLite consensus disorder prediction 314 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3638 Dere-ChrDere01 50649975 50652594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3638 9 197 C2H2 Transcription Factor Family AT5G61190 70.157 4.23e-83 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3638 01 50649975 50652594 Dere01g3638 01 50649975 50652594 ECH