Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3615 ATGTTGAAGCTTTTTTGGGCTGGCATTGTAATAGTAGGACTAGCTTTTAGCGAATGGGTTAATGGGTTCGCACAATATCACTTCAATGAAACAGAGCTGTCTTTATTGGAGGCTCATGAAGCATCCTTGGTTGGGCCGAATCCTCTGCTCGTAGGATTTACACTCATTCAAGGTGCTGCTGCCAAGGGAGCAGTCTGTTTGGATGGAACATTACCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGCTCATTAACCTGGAGGGAGGTGGTTGGTGTAATAACGTAAGAACATGTGTTTACCGCAAGAAAACAAGGCGTGGGTCATCAATATTCATGGAAAAGGAAATACCTTTTACAGGAATATTAAGCAATAATGCTGAAGAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAGCTTCGTTATTGTGACGGTGGCTCTTTTACTGGGGATAGTGAAGATAAGACTGCACAACTGCAATTTAGAGGACAACGCATTTGGTTGGCTGCAATGGATGATTTGATGTCAAAGGGAATGCGTTATGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCTGGTGGTCTGGCTGCTATTATACATTGCGATCAATTCCGTGGTTTATTTCCAAGGACTACCAAAGTGAAGTGTTTGAGTGATGCTGGGCTATTTCTCGATGTGGCTGATGTCTCTGGCGGTCGTACCCTCAGAAACCTATACAGTGGTCTTGTAGGATTGCAGGGGGTGCAGAAGAATCTGCCTCGTATTTGTACCAACCACCATGATCCCACTTCATGTTTCTTCCCTGAGAATTTGATCGCCAGCGTTAGAACCCCACTATTCATTCTCAATGCTGCCTATGATTCATGGCAGATTCAGTCCAGCATAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATTATTGCAGATTAAACCATGATAAATGTACTAGAACACAAATCCAATTTCTTCAAGGATTTAGGAATCAAATGCTGAATGCTGTTAGAGACTTCTCAAGATCAATTCATAATGGATTGTTTATTAATTCCTGTTTTTCTCACTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCCGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAAGCCATTGATTGTGCTTACCCTTGTGATAAGACATGCCACCATCTGGTTTTCAGATGA 1245 0.4337 MLKLFWAGIVIVGLAFSEWVNGFAQYHFNETELSLLEAHEASLVGPNPLLVGFTLIQGAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNVRTCVYRKKTRRGSSIFMEKEIPFTGILSNNAEENPDFFNWNRVKLRYCDGGSFTGDSEDKTAQLQFRGQRIWLAAMDDLMSKGMRYAKQALLSGCSAGGLAAIIHCDQFRGLFPRTTKVKCLSDAGLFLDVADVSGGRTLRNLYSGLVGLQGVQKNLPRICTNHHDPTSCFFPENLIASVRTPLFILNAAYDSWQIQSSIAPPSADPHGYWHYCRLNHDKCTRTQIQFLQGFRNQMLNAVRDFSRSIHNGLFINSCFSHCQTERQDTWFADNSPVIGNKAIALAVGDWYFDRAGVKAIDCAYPCDKTCHHLVFR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3615 414 PANTHER NOTUM-RELATED 47 410 IPR004963 GO:0016787
Dere01g3615 414 Pfam Pectinacetylesterase 49 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3615 Dere-ChrDere01 50416256 50420396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3615 1 414 Carbohydrate Esterase AT1G57590 66.983 0.0 596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3615 01 50416256 50420396 Dere02g0403 02 4057212 4062533 ECH
Dere01g3615 01 50416256 50420396 Dere01g3615 01 50416256 50420396 ECH
Dere02g0403 02 4057212 4062533 Dere01g3615 01 50416256 50420396 ECH