Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3599 ATGCTGCGCTTGAAAGCATTCCGGCCGACCAATGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACAGCTGATGCCTCAGATCGGGTTTCTGTTTGGAACTGGGAACACCGCCAGGTGATATACGAGCTAAAAGCTGGTGGAGTTGATGAGCGGCGTTTGGTCGGTGCCAAGTTGGAGAAGCTAGCAGAGGGAGAAACTGATTCCAAAGGGAAACCCACAGAAGCCATTCGTGGGGGAAGTGTTATGCAGGTGAATTTTTATGATGATGATGTACATTTCTGGCAACATTGGCACAATCGCTTTGCAGCTGCTGAGACTCCATCTGCCTTACATCATCTTACATCAGCTTTTAGTTCTCCTGCCCCATCAACGAAAGGAAGGCATTTTCTTGTCATATGTTGTTTAAATAAAGCTATATTTTTGGACCTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAGGAGCTTGATAACAAGTCTCTCCTCTGCATGGAGTTTCTTTATAGATCTGGTGGGAGTGATGGCCCTCTTGTTGCTTTTGGTGGATCTGATGGAGTCATTAGAGTTCTCTCAATGATTACCTGGAAGCTTGTGCGAAGATATACTGGTGGTCACAAAGGATCAATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGAGAGGCTCTTCTGGTATCCGGTGCTAGTGATGGATTGCTCGTACTATGGAGTGCGGACCATGTACAAGATTCACGAGAACTTGTTCCAAAGCTAAGTTTAAAAGCACATGATGGTGGGGTTGTGGGAGTTGAGCTTTCTAGGGTGATTGGAGGTGCTCCTCAGCTTATTACAATTGGTGCAGACAAGACGTTAGCTATATGGGACACAGTCTCCTTTAAGGAGCTGCGGCGTATAAAGCCTGTTCCAAAATTGGCTTGCCATAGTGTGGCATCTTGGTGCCATCCCCGAGCTCCAAACCTTGATATTCTTACTTGTGTAAAAGACTCACACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACAAGACCATTGTGTGAATTAACCTCTGTTATTCCTCCTCAAGCTCTTGCACCTAATAAGAAGCTCCGGGTGTACTGTATGGTTGCACATACTCTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATAATCTGTGAGTTTGATGCTAGATCTCTTCCAGCTGTAGCTGCCTTGCCAACACCATTAGACAGCCGAGAGCATTCTGCTGTATACGTAGTTGAAAGGGAACTAAAGCTACTAAATTTTCAGCTAAACAATTCAGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCTAGGGGTGATTTTTCAGAACCATTACCTATCAAGCAGGGGAAGAAACAAATTAATACGCCTGTTCCACATGATTCATATTCAGTTCTTTCTGTGAGCAGTTCAGGAAAATATCTTGCAATTGTTTGGCCCGATATTCCTTACTTCTCTGTGTACAAGGTTAGTGACTGGTCAATTGTTGATTCCGGTAGCGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCTATATTGGAATCTTCATTACCTCCTAGAATTCCTATAATTCCTAAAGGTGGTTCATCTAGAAAAGCAAAAGAGGCTGCTGCAGCTGCAGCACAAGCTGCAGCAGCTGCTGCTTCTGCTGCTTCCATGGCATCTATACAAGTGCGCATCTTGCTAGATGATGGAACGTCTAATATATTAATGAGGTCTGTTGGTGCACGAAGTGAACCGGTCATTGGTTTGCATGGAGGGGCACTACTCGGTGTTGCCTATCGAACATCTAGGAGAGTGAGCCCTGTTACTGCTACTGCTATTTCAACAATTCAGTCCATGCCCTTATCAGGTTATGGAAGCAGTGGGCTTTCTTCTTTTACGACATTTGATGATGGATTTTCCTCAAATAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTTCAGCCTGTGGGTGATCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAGTTGTTGAGTACTGTGCATTTGCATACCAGCATTACATAGTCATATCTTGTTTGCGCCCACAATATAGATACCTGGGAGATGTTGCAATTCCATATGCTACTAGTGCTGTTTGGCACCGAAGGCAACTGTTTGTGGTGACACCAACTACTGTAGAAATTGTTTTTGTGGATGCTGGGGTTGCACAAATTGACGTTGAAACTAAGAAGATGAAGGAAGAGCAAAAAAGGAAAGAAGCACAAACAAGAGCAGTAGCTGAGCATGGAGAGTTAGCACTAATTACTGTAGATGGTCCCCAAGCTACTACAGAAGAAAGAATATCATTGAGGCCACCAATGCTACAGGTGGTGCGATTGGCCTCATTTCAGCATGCTCCTTCTGTGCCACCTTTCTTAACGCTGCCAAAGCAATCTAAAGTTGATAGTGACGACTCTGGGATGGCAGAAGAAAAAAGGGCCAGTGAAGTAGCTGTTGGTGGCGGGGGAGTGTCTGTTGCTGTTACTCGTTTCCCAACAGAACAGAAGCGTCCTGTTGGGCCTCTGGTTGTGGTAGGTGTCAGAGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCACATGCTTTATCCCTGAGTCATCCTGGTATCCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCCATAAAGTGGGCAAGTAGGCTAGGGAGAGAACACCATGATGATTTAGCACAATTTTTGCTGGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCAGGAATATCTAAGAGATTGGAGTTTGATCTGGCAATGAGAAGCAATGATTTGAAGAGAGCTCTCCAGTGTCTTCTTACCATGAGTAATAGCAGGAGCATAGGACAGGATAACACTGGGCTTGGTTTGACTGACATTCTTAATTTAACGGATAAAAAAGAAGATATTATTGAAGCTGTTCAGGGTATAGTGAAGTTCGCAAAAGAGTTCTTGGATCTTATTGATGCTGCAGATGCTACTGCACAAAGTGAAATTGCTCGTGAAGCTCTCAAGAGGTTAGCTGCAGCAGGTTCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGGGGGTTAGCATTACGCCTTGCAAATCATGGAGAGTTGACACGGCTGAGTGGTTTGGTAAACAATTTGGTAACTCTTGGCTTGGGACGGGAAGCTGCTTTTGCTGCTGCGGTTTTGGGAGACAATGCTCTAATGGAGAAGGCATGGCAGGATACTGGGATGCTGGCAGAGGCTGTCCTTCATGCTCATGCACATGGACGCCCAACTTTGAAGAACTTGGTTCAGGTCTGGAACCAAATGCTACAGAGAGAGATTGAGCCTGCTACATCGCAGAAGACAGATGCTACAGCTGCCTTTCTTGCCTCTCTTGAGGAGCCTAAGCTTACAAGTTTGGCAGAAGCTGGGAAGAAACCGCCAATTGAAATTCTACCTCCAGGGATGATGTCTCTTTCTGCCCCTATCTCCATGCAGAAAAAACCAACTTCTGCTAATCAAAATTCGCAACAAACCCCTGGCAAGCCATTGGCATTGGAAGCTCCTCCTAATACCAAAGCAGAGCCACTAAGTGCTCCACCGGCTCAGCTATCTGAACCCACACCTGCACCAATTAGTGATCCACTTCCATCACAGTCCACTGCAGACTCCACACCTGATCCAGTGGCTGCTCCATCCCAGCCAAATTCAGGTGAAACCGTTGTAGATAAAAATGAAGCTCCTACTTCTGCGTCAGCAAGTGATGCTGATCAAATTGGTAGTGGGGAAACTGTTGAAGCAGCGTCTACAAGCAATCCAGCGCCAACACTGACACCAACAGAAGTCCCACCGAAAGTAGCTGAGACTCAGGAGACTAATGTTCCAACTACAGTGTCTGTTAGTGACTTCCTCGCATGA 3999 0.4569 MLRLKAFRPTNDKIVKIQLHPTHPWMVTADASDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVMQVNFYDDDVHFWQHWHNRFAAAETPSALHHLTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGGSDGPLVAFGGSDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLVLWSADHVQDSRELVPKLSLKAHDGGVVGVELSRVIGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDARSLPAVAALPTPLDSREHSAVYVVERELKLLNFQLNNSANPSLGNNSSLSETGRPRGDFSEPLPIKQGKKQINTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGGSSRKAKEAAAAAAQAAAAAASAASMASIQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPVTATAISTIQSMPLSGYGSSGLSSFTTFDDGFSSNRSPAEAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQVVEYCAFAYQHYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVVTPTTVEIVFVDAGVAQIDVETKKMKEEQKRKEAQTRAVAEHGELALITVDGPQATTEERISLRPPMLQVVRLASFQHAPSVPPFLTLPKQSKVDSDDSGMAEEKRASEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAIKWASRLGREHHDDLAQFLLGMGYATEALHLPGISKRLEFDLAMRSNDLKRALQCLLTMSNSRSIGQDNTGLGLTDILNLTDKKEDIIEAVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQVWNQMLQREIEPATSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLSAPISMQKKPTSANQNSQQTPGKPLALEAPPNTKAEPLSAPPAQLSEPTPAPISDPLPSQSTADSTPDPVAAPSQPNSGETVVDKNEAPTSASASDADQIGSGETVEAASTSNPAPTLTPTEVPPKVAETQETNVPTTVSVSDFLA 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3599 1332 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 303 IPR001680 GO:0005515
Dere01g3599 1332 MobiDBLite consensus disorder prediction 1175 1332 - -
Dere01g3599 1332 PANTHER TSET COMPLEX MEMBER TSTF 1 1256 - -
Dere01g3599 1332 MobiDBLite consensus disorder prediction 442 474 - -
Dere01g3599 1332 Gene3D - 906 1155 - -
Dere01g3599 1332 Gene3D - 3 425 IPR015943 GO:0005515
Dere01g3599 1332 SUPERFAMILY WD40 repeat-like 7 513 IPR036322 GO:0005515
Dere01g3599 1332 MobiDBLite consensus disorder prediction 1310 1332 - -
Dere01g3599 1332 MobiDBLite consensus disorder prediction 1190 1209 - -
Dere01g3599 1332 SMART WD40_4 252 294 IPR001680 GO:0005515
Dere01g3599 1332 SMART WD40_4 200 243 IPR001680 GO:0005515
Dere01g3599 1332 SMART WD40_4 1 39 IPR001680 GO:0005515
Dere01g3599 1332 MobiDBLite consensus disorder prediction 1242 1303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3599 Dere-ChrDere01 50320303 50333678 Dispersed/Wgd