Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3580 ATGTCTTCTGCCCTTGGTTACCGAAAGCCATCGTCCAACACTAGGCTGTCGCTGAGGAAGCTTGTGGTGCCCTTTTGCTGCTGCAGCTCGTCAATACGGTGCCCCGCACCCAAAATGAGCGATCTTATAGTTGGTGCCACTGTGGCCTTGTTCACTGTTTTAGTTATCCCAAAGATTTGGAAAATCTGTGTGATTTTCTTATGGAGGCCATATGCCTTGACTAGGTATTTCCATAAGCAAGGAGTCACAGGGCCACCTTGCTCTCTTGTTTCAGGTTCTCTTAATGAAATCAGAAAAATGTCGAGGGATGCAAGAGAAAAGCTTATGGATACAAGCTCACATGATATTACTCCCAGGGTTCTTCCTCACTACCACACATGGTCCTTACTATATGGGAAGACGTTTCTGTATTGGTATGGAACTGAACCAAGGATTTGCATTTCTGACCCTGATCTGGCCAAACACATCCTATCTTCCAAGTTTGGTTTCTTTCCCAAACCCAAGGTTAGGCCTTCCTTACAAACTCTGATAGGGAAAGGCTTGGTTCTGATCAATGGGCTTGACTGGGCTAGGCACAGAAGGATACTCTCCCCTGCCTTCACTATGGATAAACTTAAGATTATGACAGAAAGAATGGCAGCATGTACTATTTCCATGCTTGATGAGTGGAAAGCTCAGGCCAGTAAGGCAGAGGACAAAACTAAGACTATAGAGATGAGTGAGGAATTTCAAGAGCTTACAGCAGATATAATAGTCCAAACTTCTTTTGGTGGTAGCTTTGTCCAAGGAAGGGAGGTCTTCAATTCCCAGAGAGAGCTTCTACAACACTGTGTAGCATCAAATGCTAGTGTTTTCATTCCTGGCACCCAATATGTTCCAACCCCATCAAATCTTCAGATGTGGAAGCTTGACAGGAAAGTGAAGAAATCAATAAAGCGCATAATAGAAACTAGATTACATTCTGAATCTTATGGTGATGATCTGCTTGGTATAATGATGGAAGCAGCAGAAACAAATAGTGGTCCTAAGTTGAGCATGAAGGAAATCATAGAAGAATGCAAATCATTCTTCTTTGGTGGCCACGAAACCACTTCAAACTTGCTAACTTGGGCATCATTCCTGTTAAGTTCACACAATGAATGGCAAGAGAAACTCAGGGAAGAGGTCTTACAGAACTGTGGTATGGAAGTTCCTGATGTGGATTCAATATCGAAGTTAAAAATGATGAATATGGTATTGCTGGAAGCCTTAAGATTGTATTGCCCCGTAATAATGGTAGTGAGGGAGGCAGCCCAAGACATGAAACTGGGAAATTTGCTGATACCGAAAGGTACACATCTTGCAATCCCATTTGTGAAAATTCATAGCAGCAAAGAATACTGGGGTGAAGATGCGAATGAGTTCAATCCAATGAGATTTGTGAATGGAGTTTCGAAAGCTGCAAGAAACCCAAATGCTCTACTTGCATTTGGAATTGGTCCAAGGACATGCATTGGTCAGAATTTCGCAATGCTGGAAGCTAAAATGGCGATGGCTTTGATTCTTCCAAGGTTTTCTTTGTCCCTTTCTCCTCACTACAAGCATGCACCAGCAAACAACGTTACTTTGCAGCCACAACATGGCCTTCCTATCATTGTAAAACTTCTGCACATTTAA 1656 0.4263 MSSALGYRKPSSNTRLSLRKLVVPFCCCSSSIRCPAPKMSDLIVGATVALFTVLVIPKIWKICVIFLWRPYALTRYFHKQGVTGPPCSLVSGSLNEIRKMSRDAREKLMDTSSHDITPRVLPHYHTWSLLYGKTFLYWYGTEPRICISDPDLAKHILSSKFGFFPKPKVRPSLQTLIGKGLVLINGLDWARHRRILSPAFTMDKLKIMTERMAACTISMLDEWKAQASKAEDKTKTIEMSEEFQELTADIIVQTSFGGSFVQGREVFNSQRELLQHCVASNASVFIPGTQYVPTPSNLQMWKLDRKVKKSIKRIIETRLHSESYGDDLLGIMMEAAETNSGPKLSMKEIIEECKSFFFGGHETTSNLLTWASFLLSSHNEWQEKLREEVLQNCGMEVPDVDSISKLKMMNMVLLEALRLYCPVIMVVREAAQDMKLGNLLIPKGTHLAIPFVKIHSSKEYWGEDANEFNPMRFVNGVSKAARNPNALLAFGIGPRTCIGQNFAMLEAKMAMALILPRFSLSLSPHYKHAPANNVTLQPQHGLPIIVKLLHI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3580 551 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 Pfam Cytochrome P450 131 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PANTHER CYTOCHROME P450 FAMILY MEMBER 62 541 - -
Dere01g3580 551 SUPERFAMILY Cytochrome P450 118 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 FunFam Cytochrome P450 734A1 67 550 - -
Dere01g3580 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Dere01g3580 551 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS E-class P450 group I signature 246 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 PRINTS E-class P450 group I signature 128 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g3580 551 Gene3D Cytochrome P450 108 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3580 Dere-ChrDere01 50152398 50155232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3580 60 550 Cytochrome P450 AT2G46960 57.229 0.0 597