Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3571 ATGGAAAACCATCAACACCGCCATGAATTGAGCTTCACGAGCTCCGTCGACTTCCTCAGGCAGAATTCAGATCGAATAAACGACAACTCCAGCAATAGTCCGACTCCGATCATCAGAGAAAGGGATTTCTTCTCCGCTTCACCCAATAAATCTTGCGGAATTGAAAATCACCAGCCTCAAGATCCTGACAGGATCGTCAATCACGATGGATCATCAAGTACTCCCCTATCTGATCGCCCAGTCAACACCGGATTGGATTTAAAGTGTGCAAGTCCTGGAATGCCAAGATTGGAAAGTGACAAGAAGGTCGATACTAAGCTGAGTTCACTTCAAGGTGAATTGCGAAGATTGCATGAAGAGAATAGGCAGTTGAAAAGCATGCTGGATCAGATCACCAAAAGCCATAACCAACTGCAGGCTCAGCTGTTTATCGCTTTGCATAAACAAAAGTCTCAGAAGATTGAAACAAATGGGATTTTGTCGGGGCAACAGTTATTGGACCCACGACCATCTACCAATTTAGACGTCAATAATGTGTCGGTTTCAGACGATAAGACCCAAGAGCTTTCAGTTTCTCCTTCATCGAACAATGCGGAGGTAATGTCAAAGCAACGTGACCACCACTACCACCAGCATCATTGGCCTAAACTTCTTGGCAAGCAAGTAGCCTGTCCTGAAGATGCTCTTGACCGTTCCTCTCAGAGTTCCAAGCTACATGATTCCAAAAGCGAAGAACAAAATGCGGATATCACTTTCAGAAAAGCCAGGGTTTCCGTGCGAGCAAGATCAGAAGCTGCTCTGATTAGTGATGGATGTCAATGGAGAAAATATGGTCAGAAAATGGCCAAGGGTAACCCTTGCCCTCGTGCCTACTATCGTTGTACTATGGCCGTAGGTTGCCCCGTTCGTAAGCAGGTGCAAAGATGTGCCGAGGACAAGACGGTGCTGATAACAACATACGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACTGCAATGGTGAATACGACATCGGCAGCGGCGGCGATGCTTCTATCAGGTCCAACTACGAGCAAGGAAGCGTCAACAAACTCTGGAGGGTACTTCGCTTCTATGCCCTACGCCTCAATGGCAACCCTCTCAGCCTCCGCACCATTTCCTACTATCACTCTTGACTTGACTCAGACCCCGAACGGCGTCCAGCTTCACCGGGTACCGTCGGCGGGGGTCACATTTCCTCTGCCATTGCATGGTTGCCCGCAGCTAATAGGGTTCTTCCCTCAGAAGCTACCGGCTGTGCCGGTAGTGAATCAGGTAGGGCAGCAACGACAGCCTTCTATGGTTGAGACGATGAGTGCAGCTATTGCTTCTGATCCCAATTTAAATGCGGCGCTGGCTGCAGCAATTTCGTCTATCTTTGGGAGTAATACGAATAACAATGGTGGAATTGGAAATGCTGTTTCCCTTAACGGGATTTCCTTATCGCCTGGGTCGCCACAGCTTCCTCAGTCCTGCACTACATTCTCCACCAACTAG 1521 0.4878 MENHQHRHELSFTSSVDFLRQNSDRINDNSSNSPTPIIRERDFFSASPNKSCGIENHQPQDPDRIVNHDGSSSTPLSDRPVNTGLDLKCASPGMPRLESDKKVDTKLSSLQGELRRLHEENRQLKSMLDQITKSHNQLQAQLFIALHKQKSQKIETNGILSGQQLLDPRPSTNLDVNNVSVSDDKTQELSVSPSSNNAEVMSKQRDHHYHQHHWPKLLGKQVACPEDALDRSSQSSKLHDSKSEEQNADITFRKARVSVRARSEAALISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMVNTTSAAAAMLLSGPTTSKEASTNSGGYFASMPYASMATLSASAPFPTITLDLTQTPNGVQLHRVPSAGVTFPLPLHGCPQLIGFFPQKLPAVPVVNQVGQQRQPSMVETMSAAIASDPNLNAALAAAISSIFGSNTNNNGGIGNAVSLNGISLSPGSPQLPQSCTTFSTN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3571 506 MobiDBLite consensus disorder prediction 65 80 - -
Dere01g3571 506 FunFam probable WRKY transcription factor 31 253 330 - -
Dere01g3571 506 MobiDBLite consensus disorder prediction 228 249 - -
Dere01g3571 506 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g3571 506 MobiDBLite consensus disorder prediction 46 84 - -
Dere01g3571 506 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g3571 506 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 99 474 IPR044810 GO:0003700
Dere01g3571 506 Gene3D WRKY domain 253 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g3571 506 Coils Coil 107 141 - -
Dere01g3571 506 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g3571 506 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g3571 506 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3571 Dere-ChrDere01 50060394 50062979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3571 1 506 WRKY Transcription Factor Family AT4G01720 42.617 5.59e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere01g3571 WRKY 5.2e-24 CL0274