Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3559 ATGGCTTTCTCTGTGACCAGAACAAAACGTGGCTTAGTTAAACCAGCAGAGAAAACACCTTCCACCCCATTAAACCTATCAGTCATCGATAGATTACCTGTTCTAAGTTGCAATGCTCGAACCTTGCACGTGTTCAGACATGGCCCTGAAGCATCAATGGTCATTAGAAAAGCCTTGTCCAGAGCATTAGTTCCATACTACCCTCTTGCAGGAAGACTTGCACAATCCCAACATGGTCACCTCCAAATTGAATGCTCAGGTGACGGTGTGTGGTTCGTTGAGGCATCGGCTTCTTGCACCCTTGCTTCTGTCAATTACTTCGATGACGTTGAATCTATCCCATACGATGAACTTCTTCCTGATCAAATCCCTGCGACTGAAGGCGTCGACCCCCTCGTGAAAATACAGGTGACACAATTTGGTTGCCTGGGATTTGTGATAGGCCTAATATTCTGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTTTAAATGCCATTGGGGAGGTAGCCAGAGGTCTTGAAAAACCCAGCATTGACCCGGTGTGGCAAAGAGACTTCTTTCCACCACTACCTGATGAAACTGTGGCTACATTGCCAAAACTACCACCTGGTCCACCACCAATGCCAGACTACCAGCTAGCACATGCTAAGTTAGACATACCAATAGATCAAATCCACCGGCTTAAGCGAGAATTTCAGGAAGTAACTGGACAGAATTGCTCTGCCTTCGAGATTGTAGCTGCAGGGTTTTGGAGCAGTCGAACTAGAGCTATAAATTTCGATCCGAATACCCAAGTGAAGCTGGTCTTCTTTGCCAATTGCCGTCAGCTCTTGGACCCTCCTCTGCCTAAAGGCTTTTATGGCAACTGCTTCTTCCCTGTCACAATTACTACTCCATCAGAGACACTTACACAGGCATCAATCATTGATGTAATTAAGTTGATCCAAGAAGCCAAGGCCAAGCTACCCGTTGAGTTTGACAAGTACTTGAAGGGTGAGTATTTGAAGGATGGGGAAGACCCGTTTGCTCCTCCTCTGACATACACCACTCTGTTCATATCGGAATGGGGAAGGCTAGGATTCAACCAGGTGGACTACCAGTGGGGGCCACCAGTCCACGTGGTCCCCATACAAGGCTCTAGCATCATACCAGTTGGCATAGTGGGATCACTCCCTCACCCAAGCAAAGGGATTTGTTTGATGACATGGTGTGTGGAGGAGGCTCATCGTCATCCCTTCCTTGATCACATGGTGACATGGACAAACTAA 1275 0.4729 MAFSVTRTKRGLVKPAEKTPSTPLNLSVIDRLPVLSCNARTLHVFRHGPEASMVIRKALSRALVPYYPLAGRLAQSQHGHLQIECSGDGVWFVEASASCTLASVNYFDDVESIPYDELLPDQIPATEGVDPLVKIQVTQFGCLGFVIGLIFCHSICDGLGAAQFLNAIGEVARGLEKPSIDPVWQRDFFPPLPDETVATLPKLPPGPPPMPDYQLAHAKLDIPIDQIHRLKREFQEVTGQNCSAFEIVAAGFWSSRTRAINFDPNTQVKLVFFANCRQLLDPPLPKGFYGNCFFPVTITTPSETLTQASIIDVIKLIQEAKAKLPVEFDKYLKGEYLKDGEDPFAPPLTYTTLFISEWGRLGFNQVDYQWGPPVHVVPIQGSSIIPVGIVGSLPHPSKGICLMTWCVEEAHRHPFLDHMVTWTN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3559 424 PANTHER ACYL TRANSFERASE 4 1 420 - -
Dere01g3559 424 MobiDBLite consensus disorder prediction 1 20 - -
Dere01g3559 424 Pfam Transferase family 4 379 - -
Dere01g3559 424 Gene3D - 1 200 IPR023213 -
Dere01g3559 424 Gene3D - 201 416 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3559 Dere-ChrDere01 49949114 49950488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3559 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.250 2.59e-33 128