Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3553 ATGTTTAAGATTGCTTCAACACTTTCAGATACACAAGATTATAGCTTTAAGTCGCCTAGGCTGAAGCATTCCACACCAAAAGCCCACTTTCGAAACTTCAATATTTACCTACGTGCAGTTCCCAATGATGAAAAAGACGATTGTTGTCTTGCAGTCGGTCACCATATAACGTCCTCTCACAACGTCATTTTCTTCCTCGTCAATGTGCTGGACAATGGAGCTGAGACAAGCAAGCAAAACAGCCTCTGCGATCAATGGTACAACGTCGAACATGAGGAAGAAGACGATGGCGTGTCCTACCAATCATGGCCAAAACGACGCAGGACAATTCTTGTTGTGAGACAAAATAAAAGTAATGATGGTGAAGATAGCGGGTTGAGCTCCAATAATAAGGCCGTGACGGTCAATTGCCAAGGCTCAGACCAGCAGAAGGATTGCGAAGACACTCTGAACTCCGTTAACTCCTCAGATCCAAAGGATTACATCAAGACGGCGGCGGAAAAAGTGATGGGGACAGTGATAAAGCCCTTTAACATGAGCGACAGGCTCACAGTTGAACACAGCAAGGGTGATAACCAAGGAGTGAAGATGGCTGTAGAGGATTGCAAGGACTTGATGGAGTCAGCCATTGATTCACTACAGGCCTCTAATGCTATGTTGAGAAACAACGACATTAGAAGTATCTAA 687 0.4469 MFKIASTLSDTQDYSFKSPRLKHSTPKAHFRNFNIYLRAVPNDEKDDCCLAVGHHITSSHNVIFFLVNVLDNGAETSKQNSLCDQWYNVEHEEEDDGVSYQSWPKRRRTILVVRQNKSNDGEDSGLSSNNKAVTVNCQGSDQQKDCEDTLNSVNSSDPKDYIKTAAEKVMGTVIKPFNMSDRLTVEHSKGDNQGVKMAVEDCKDLMESAIDSLQASNAMLRNNDIRSI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3553 228 Pfam Plant invertase/pectin methylesterase inhibitor 137 219 IPR006501 GO:0004857
Dere01g3553 228 Coils Coil 203 223 - -
Dere01g3553 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 132 225 IPR035513 -
Dere01g3553 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 129 228 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3553 Dere-ChrDere01 49924694 49927619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3553 119 213 Carbohydrate Esterase AT3G05610 35.000 1.65e-07 49.7