Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3494 ATGGAGAATAACCATTTTTCTTTCGCACCTTTCAATTTCAGTGGCATCCAGGGCGTTTCTGGTTCTGTACAAGAGGAAGTAGTTGAGTTCCAAGGGAAACACAGTTTGTCTGGAATGAACTTTCAGGGAGACATTAATTCTCTCCCTACCGCGCGTGGGAATGGAGCCCAATTATTCAAAGATCAAAATCAAAAGCAACAAGAAGAGCCCAAATTTGACATCTCAATGTTCGAAGAGTTCAGCCTCGAATCTGCTCTGCAGACCCCACAGCCGTTTCCGCAAACCATGGGGCTAAAGAATCAGGGAGTGGCAAATTCAGAACATGTTGATGAATGTCAAAACAAGCAGGTGCCTCAATCTTCTTTAGCATCGTTGGAGCTCCTGAACAGTTACGCAAGTAGGTTCAAGAAGCTAAGGGTCCAAGACGTAACCAACTTAAACAAAAGTGAAGATCGTGTGGATCGCCAGAATTTATCAGCGGAAGAAATAATAAGAGTGGCTGGAGCCAGGTATGTCGAATTCTCTGCTCATTGGTACGATAATTTCTGCATGCCTATGCACCCATATGGCTTTGGTCTCGGGACTCTGTCTGAGGAAGAAAACAGAGATATTGAACTTGCCCAGTTTCTTCTTGCTGCCGCCGAGAGGGTTGGTTGCCAGCAATTTGAACGTGCAAGCAGATTGCTTCTTCATTGTTTATTTAATTCATCTCCTGGTGGAAACGCTGCACAGAGAATTATCTTCCATTTCGCTCAAGCACTTAGAGAGAGAATCGAAATAGAGGCGGGGAGGATCACTTTAAAGGGGTTTGATAAGAACATAGAAAACGAATTAATTCATAAGATAGATAACAACATTGCTCTTTCTTGCCATCAGAAAATCCCTTTCAATCAAGTGATGCAATTCGCAGGCGTACAAGCTATTGTGGAACACGTTGCAGCCGAAACCAAAATCCATTTTATAGATATCAATATTAGACGTGGGATACAGTGGACAGGTTTGATGCAGGCATTGGCAGAGAGGCATGAAAGGCCAGTGGTGCTTCTGAAGATAACTGCTATTGGAATTACCGGCCAACCCGCGTTTGAAGAGACAGGCAGAAGATTGGCAAGTTTCGCTGAGTCGTTGAACTTGACATTTTCATATAAGCAAGTTTTTGTTTCAGACATGATCGAACTCAAGGAACAACATTTTGAAATTGAAGATGATGAAGCTGTGGTTGTATACGCTTCAAATGTACTGAGGACAATGGTATCAAGGCCTGAATACTTGGAAAACTTGATGAGTGTAATGAGAAATATCAAACCAACTATAATGATTGTCGTTGAAGTGGAAGCCAATCATAATTCATCCTCCTTTGTGAATCGCTTCATTGAAGCATTGTTCTACTATGCCGCATTTTTCGATTGCCTTGAAACCTGCTTAAAAGAGAATAATGAGAGTAGAATGACAGTGGAAACAATAGTGTATGAAGGGATACGAAACATTGTTGCTGCAGAAGGACGAGAAAGAACAGTGAGGAATGTGAAGATAGATGTTTGGAGGAGGTTCTTTGCGAGGTACAGAATGGTGGAAATTGAACTCAGTGAGTCGTCTCTGTACCAAGCTAACTTGGTGGCCAACGAGTTTGCTAGTGGGAATTTATGCACTACGGATAAAAATGGGAAATGTCTAATAGTTCGGTGGAAGGGGATCCCAATGCATTCCCTTTCAGCTTGGAGGAGTTCTCATCTGCCTTATGATCTTCTCCACGATTCTATTCTTCTCAGGGTTAGTGGTGCTTAA 1785 0.4241 MENNHFSFAPFNFSGIQGVSGSVQEEVVEFQGKHSLSGMNFQGDINSLPTARGNGAQLFKDQNQKQQEEPKFDISMFEEFSLESALQTPQPFPQTMGLKNQGVANSEHVDECQNKQVPQSSLASLELLNSYASRFKKLRVQDVTNLNKSEDRVDRQNLSAEEIIRVAGARYVEFSAHWYDNFCMPMHPYGFGLGTLSEEENRDIELAQFLLAAAERVGCQQFERASRLLLHCLFNSSPGGNAAQRIIFHFAQALRERIEIEAGRITLKGFDKNIENELIHKIDNNIALSCHQKIPFNQVMQFAGVQAIVEHVAAETKIHFIDINIRRGIQWTGLMQALAERHERPVVLLKITAIGITGQPAFEETGRRLASFAESLNLTFSYKQVFVSDMIELKEQHFEIEDDEAVVVYASNVLRTMVSRPEYLENLMSVMRNIKPTIMIVVEVEANHNSSSFVNRFIEALFYYAAFFDCLETCLKENNESRMTVETIVYEGIRNIVAAEGRERTVRNVKIDVWRRFFARYRMVEIELSESSLYQANLVANEFASGNLCTTDKNGKCLIVRWKGIPMHSLSAWRSSHLPYDLLHDSILLRVSGA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3494 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 562 IPR005202 -
Dere01g3494 594 Pfam GRAS domain family 207 574 IPR005202 -
Dere01g3494 594 ProSiteProfiles GRAS family profile. 197 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3494 Dere-ChrDere01 49380984 49383178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3494 196 580 GRAS Transcription Factor Family AT2G01570 29.367 1.03e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere01g3494 GRAS 2.1e-79 CL0063