Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3451 ATGGCGGCAGAGAGGACATTGTCGTTTTCGGTGGCATCGGTGGTGGAGGATGTGCTTCAACAGCACGGGACTCAGCTCAAAGACCTTGATTTGGAATCCAGAAAAGCAGAAGAAGCTGCATCAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAGATGGTTGGAGTTGTTGCAGCAAAAGATTTACCAGCCGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATCCTCTGCAACGTTATTAATAAGGTTCAAACCGGAGCTGTACCCAAGGTCGTGGAAAGTCCTATTGATTCTGCAATGATCCCAGACGGGGCACCATTATCGGCATATCAGTATTTTGAAAATGTGAGAAACTTTCTTGTGGCTGTCCAGGAAATTGGACTTCCTACCTTCGAGGCATCTGATCTGGAACAAGGAGGAAAGTCAGCCAGGATTGTGAATAGCGTTTTGGCCCTTAAATCCTATAGTGAATGGAAACAGAATGGGGCAAATGGCGCGTGGAAATTTGGTGGAACTCTGAAACCCACAACCACAGGAAAAACTTTTGTCAGAAAAAACTCAGAGCCATTTACTAATTCCCTGTCAAGGAACTCATCCATCACTGAAAAATCTGTGACAGCTTTAACCTCTGACGTTGAATCTAATAAAATGTCGGTTTCTCATTCTTTGAGTATGCTTGTTCGTGCAATGCTATTGGACAAGAAGCCTGAAGAAGTTCCAATGTTGGTCGAATCCGTTTTGAATAAGGTAGTACAGGAGTTTGAGCATCGCATTGCAAGTCAAGGTGAACAGACAAAAACAGCTTCAAGAGACGCTGTTTCTCAAGGCAATGCTTCTGTACCAAAGCTTGTTTTGGGAGATAAGAAGGGGGAGAATAAGACTCCTGCGGTTAACAAGAAAGCTGATGAGGAATTACAAACCCAACTTCTGAAACAGCAACTGCACTTTGATCGACAGCAAAGAGAAATCCAAGAACTAAAGCAGTCGCTTCACACCACAAAAGCCGGTATGCAGTTCATGCAAATGAAATTTCACGAGGAATTCTCCAATCTTGGTATTCACATACATGGCTTAGCTCATGCTGCTTCTGGATATCACAAAGTTCTTGAAGAAAATCGCAAACTGTACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCCTTCTTACCTGGACGATCAAACTATTTGAGCACAGTGGAAAGTATAGAAGATGGAACTATCACAATTAATGTCCCATCAAAGAATGGGAAAGGACGCAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGCAAGCCAAGCGGAGGTCTTCTCCGACATGCAGCCTCTCATTAGGTCTGTTCTTGATGGGTATAACGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTTCACTATGACTGGACCGAAAGAGATCACAGAGAAAAGCCAAGGGGTAAACTATCGGGTTCTAGGTGACTTGTTTCTTATAGCAGATCAGAGAAAAGACACTTTTCGTTATGATGTGTCTGTTCAGATGATTGAGATTTACAATGAGCAAGTCCGGGATCTGCTAGTTACTGATGGAAGCAACAGAAGATATCCTTTTATCTGTCATATAACTGCCTCCAGCTCTTGTATGAGATATGGCCATTGA 1683 0.4302 MAAERTLSFSVASVVEDVLQQHGTQLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQTGAVPKVVESPIDSAMIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSARIVNSVLALKSYSEWKQNGANGAWKFGGTLKPTTTGKTFVRKNSEPFTNSLSRNSSITEKSVTALTSDVESNKMSVSHSLSMLVRAMLLDKKPEEVPMLVESVLNKVVQEFEHRIASQGEQTKTASRDAVSQGNASVPKLVLGDKKGENKTPAVNKKADEELQTQLLKQQLHFDRQQREIQELKQSLHTTKAGMQFMQMKFHEEFSNLGIHIHGLAHAASGYHKVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGRSNYLSTVESIEDGTITINVPSKNGKGRRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRVLGDLFLIADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGSNRRYPFICHITASSSCMRYGH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3451 560 MobiDBLite consensus disorder prediction 265 305 - -
Dere01g3451 560 Gene3D - 27 182 IPR036872 -
Dere01g3451 560 ProSiteProfiles Kinesin motor domain profile. 390 560 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3451 560 SMART kinesin_4 388 558 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3451 560 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Dere01g3451 560 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 542 IPR027640 GO:0003777|GO:0007018
Dere01g3451 560 Pfam Microtubule binding 376 534 IPR031852 GO:0008017
Dere01g3451 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 548 IPR027417 -
Dere01g3451 560 CDD CH_AtKIN14-like 42 159 - -
Dere01g3451 560 Gene3D Kinesin motor domain 334 553 IPR036961 -
Dere01g3451 560 MobiDBLite consensus disorder prediction 266 281 - -
Dere01g3451 560 Coils Coil 19 39 - -
Dere01g3451 560 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Dere01g3451 560 SMART ch_5 42 160 IPR001715 GO:0005515
Dere01g3451 560 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Dere01g3451 560 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Dere01g3451 560 MobiDBLite consensus disorder prediction 291 305 - -
Dere01g3451 560 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 332 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3451 Dere-ChrDere01 49035473 49038872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3451 378 541 Calmodulin-binding Proteins AT5G65930 39.053 1.60e-30 125