Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3450 ATGTTGTTGCTTGAACAGTTGCACTTGACCACTAATACATTAGAAATTCGTAGTAGTTCTCACAAGGGGCTCAGTGTACCTGATGCAAACCTTGTTCCTGTATCATCAACTGTTGATGTTATTGATTTGATGAACCTGGGGCAAAGGAATCGTGCTGTTGGAGCAACAGCCCTTAACGATCGAAGTAGCCGCTCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAACTATCCTTCGTGGATGCATGCATCTTGTTGATTTGGCAGGAAGTGAGAGGGTGGACAAATCGGAGGCCACAGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTCTCGGCTTTGGGTGATGTCATCGCTTCCCTTGCTCAGAAAAATCCTCATGTCCCATACAGAAACAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTCGTCCACATAAGCCCTGAGAGTGATGCTGTTGGAGAAACAATTAGCACCTTGAAATTTGCCGAAAGAGTTGCCACAGTTGAGCTTGGAGCAGCTCGAGTTAACAAAGATAGTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAGGCGGCATTGGCAAGAAAGGAGGGAGAATCAGAACACGTGCAACATTCTTTATCTGGTAGCTCTGAAAAATGCAGGAAAAAAGCTAGTGAGCTATCACCTTATCATACTGACAAGCGGGGTGCAGACACAGCGGGTGACCTTGGATGCCGGCAACCTATGGTTGATGTTGGCAACATAGAGCTTCACAGCAATGGCACGTTGAGGCCAAAAACCCAGAGCTTTGACTTTGATGAGATATCAACAAATTCACCACCTTGGCCCCCTGTGGGTTCTGGACCAAACTCTGGGGAAGATGATAAAGAAACTACGTCGGGAGAGTGGGTTGATAAGATCATGGTAAACAAGCTAGATGTAAGCAAAACTGAGAACCCCTTGGGGTGTTGGGAAGCAGCCAACGGGCACTTATCTGATGTCTTTTATCAGAAATATCTCCACGATTCTTCCAACATATGCACAGATCAATCCTATAACATGTTCATGGGAGGCAACCAGTTCAACGTTGCAGGTTCAGATGAAATGGACGATCTTGACGCTGCAACCAGTGATTCCTCGGAACCGGACTTACTTTGGCAGTTTAATCATTCCAAACTTACCAGCGTAGCCAATGGAATTGGACCAAAGGCTAAGATATCTATCTCAAAGTTAGCGAAAAGCCCAGAATTGAGCAAGAATATCATTAATCCTCCTCTTGGTCCTTCACCTTCACGGAAACAATCAAATGGAGTCTCACATCATCGATCGGGAAGGCACCCAGCTCCGGTCGACGTGAAGCGTAAGACTGGGAATAGAAAATAA 1428 0.451 MLLLEQLHLTTNTLEIRSSSHKGLSVPDANLVPVSSTVDVIDLMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAVGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARKEGESEHVQHSLSGSSEKCRKKASELSPYHTDKRGADTAGDLGCRQPMVDVGNIELHSNGTLRPKTQSFDFDEISTNSPPWPPVGSGPNSGEDDKETTSGEWVDKIMVNKLDVSKTENPLGCWEAANGHLSDVFYQKYLHDSSNICTDQSYNMFMGGNQFNVAGSDEMDDLDAATSDSSEPDLLWQFNHSKLTSVANGIGPKAKISISKLAKSPELSKNIINPPLGPSPSRKQSNGVSHHRSGRHPAPVDVKRKTGNRK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3450 475 Coils Coil 193 220 - -
Dere01g3450 475 MobiDBLite consensus disorder prediction 459 475 - -
Dere01g3450 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 222 IPR027417 -
Dere01g3450 475 MobiDBLite consensus disorder prediction 271 315 - -
Dere01g3450 475 PANTHER KINESIN-LIKE PROTEIN KLP-3 12 253 IPR027640 GO:0003777|GO:0007018
Dere01g3450 475 Pfam Kinesin motor domain 3 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3450 475 MobiDBLite consensus disorder prediction 221 255 - -
Dere01g3450 475 MobiDBLite consensus disorder prediction 432 475 - -
Dere01g3450 475 MobiDBLite consensus disorder prediction 275 291 - -
Dere01g3450 475 Gene3D Kinesin motor domain 3 228 IPR036961 -
Dere01g3450 475 ProSiteProfiles Kinesin motor domain profile. 1 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3450 475 FunFam Kinesin-related protein3 23 228 - -
Dere01g3450 475 MobiDBLite consensus disorder prediction 221 258 - -
Dere01g3450 475 SMART kinesin_4 1 194 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3450 475 PRINTS Kinesin heavy chain signature 136 157 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3450 475 PRINTS Kinesin heavy chain signature 87 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g3450 475 PRINTS Kinesin heavy chain signature 56 73 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3450 Dere-ChrDere01 49033410 49035380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3450 14 222 Calmodulin-binding Proteins AT5G65930 44.976 4.57e-43 161