Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3423 ATGGAAGAGGGAATCGATTTGAAAGCAGGAGGCAAGAGCAAGAAGACCAAGCGAACGGCTCCCAAATCTGATGATATTTACCTGAAGCTCCTTGTTAAGCTTTACAGGTTTCTTGTACGGAGGACTGGCAGTAAGTTCAATGCGGTCATTCTAAAACGGCTTTTCATGAGTAAAGTCAACAAGCCACCACTATCTCTCTCTCGCTTGATTCGTTTCATGAAGGGAAAGGAGGACAAAATCGCAGTTATTGTTGGGGCAGTGACTGATGACATTCGGGTGTATGAAGTTCCAGCTCTGAAGGTGACTGCCCTGAGGTTCACAGAAACTGCCAGAGCTAGAATTGAGGAGGCTGGCGGAGAGTGCCTGACATTTGATCAATTGGCTCTTAGAGCTCCTCTAGGCCAGAACACGATTCTCCTTAGAGGTCCTAAGAATGCCCGTGAAGCTGTTAAGCACTTTGGGCCAGCTCCTGGTGTGCCACATAGCCACACTAAACCCTATGTCCGTTCTAAAGGTAGGAAGTTCGAGCGGGCCAGAGGAAGAAGAAACAGTAGAGGCTTCAGTGTTTGA 570 0.4789 MEEGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIRFMKGKEDKIAVIVGAVTDDIRVYEVPALKVTALRFTETARARIEEAGGECLTFDQLALRAPLGQNTILLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFSV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3423 189 FunFam 60S ribosomal protein L18 3 189 - -
Dere01g3423 189 MobiDBLite consensus disorder prediction 166 180 - -
Dere01g3423 189 MobiDBLite consensus disorder prediction 153 189 - -
Dere01g3423 189 PANTHER 60S RIBOSOMAL PROTEIN L18 4 188 IPR000039 GO:0003735|GO:0005840|GO:0006412
Dere01g3423 189 SUPERFAMILY Ribosomal proteins L15p and L18e 22 141 IPR036227 -
Dere01g3423 189 Pfam Ribosomal protein 60S L18 and 50S L18e 4 188 IPR021131 -
Dere01g3423 189 Gene3D - 3 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3423 Dere-ChrDere01 48773433 48776900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3423 5 189 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.108 1.39e-105 299