Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3374 ATGATGGAGGTCCAGAAGGACGAATTTTCTGAGCCAGAAATTGGAAGTTCCGTGGAGTCGTTCCAGAAGTTCTTGGTTTCACAAAGGGAACTCTTCCGTAGCCAGATCGATCAGTTTCAGAAAATTTTCGTCACGCAATGCAACCTCGCTGGCGTGAATCCTCTCTCTCAAGAAATGGCTGCTGGTGCTCTGTCAATTGAAATTGGAAAAAGACCTAGGGACTTGTTAAATCCAAAAGCTGTAAATTACATGCAATCAATTTTCTCCATTAAAGATGCAATTAGCAAGAAAGGATCTCGTGAGCTCAGTGCTTTATTGGGCATCACAGTGACACAGATCCGTGAGTTTTTTGCTAGTCAGCGTGCAACAGTAAGGAGACTAGTTCAATCATCAAGGGAGAGGACGATGAGATCTAATTCTTGTGAAGAAGATCATGATGAAGTCCTGCTAAACTCTGATTCTTTCAGACCAATCAATCCAGCTCCTATAAGTTCTGCTGGCCCCAGCAGTGTTGAAGATGCATCTTGTTCTACACAGGATAATGCTTTGTCCGTCCTAGATGACTTAAATAAACATTTTGTTGAGAATATTTTCATTTTAATGCGCAAGGAGGAATCATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGAAGATACAACATTATTCAGTATTATGTTGGTTTTTAAGCGGTGGAGGTTTGATGATATTAGCAACTTGGTTGAGTGAAGCAGCTGTTGAAGAGCAAACAAGTTTTCTTCTTCTTATCTTGAAGGTTCTCTGTCATTTGCCTTTACAAGAAGCCCTTCCTGCACACATGTCAGCTATATTGCAGTGTGTTAATAGACTGCAGTTCTATAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCAAGGAATCAAACAATCAAGAACCCCCATGGTGTTAAACTTTCTTTTGATGCTCAAAAGGAGATGGTGCCAAATCAGAGTTTTGGTCATGTAATGGGTACTGAATCATGGCATCCACATATTGATGTTCCTGAAGACTTTCTTTCCCTCTCAAACAAAAGTTTAGATAATTTAAGGAAAGTAGAATCCCCAAAAGTTGTGAAACTGTTGCCAGCCTCTTTTAATGATTCAACTAAGAAGCCTGCATTAGGTGTTTCTTCATCTCAAGCTAGGGAGCGCAGAAAAGTGCAGCTGGTGGACCAGCCTGGCCAGAAAACATTGAGCAGAAGCCCAATTGCCACAAGAGTGGGGCCTGTTAGTCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATATAAGCAGGGCAAGTATGGGAAAACTAGTTCATCAACAGGAATTAAAGAATCAAAGACTGATGGTCTGCATAAACCTCAGACAAATCAGGCCAGTCTTGTGGCTTCTCTATCTGAAGTTCCTCTTTCACCCCAAATTAAGGATGACAAGAAACTTCTGTTGATTCCCTCTAAAGTCTCCAATAGCCCGGAAGCTTCCCTTGACTCAAAACTGAGAATGGATTTCAAGGTACCTCTCTGGGAGAAATGCATGGGGGTGCAAATCCCATGGAAGACACCGGCAGAATTGAAACTTAACGTTGGCTGGAGAGTTGGTGCTGGTGAAAACAGCAAAGTCATTGATGTCCAGAAAAACAGAAACCAACGGGAGGAGGAAACTGTTTATCAGACTTTCCAGGAGATACCATCTAACCCCAAGGAGCCATGGGACCTCGAGATAAACTATAATGACACTTTGACACCCGAAATTCCTATTGAGCAGCAGCCAGGTGGTGATGATGTAGAAACTTTAGTTAACCCTAGTCAAGGTGCGACCCTTGCTGTTCAAGTGGCAGCTACCTCGTTTCCAAACTGTGATGTAGGTACTGCTAAACCTGATTTAGAGCTGCTTGCCGTACTGCTAAAAAACCCAGAGTTAGTATTTGCCTTGACTTCTGGGCAAACTGGTGGCTTACCAAGTCAGGAAACTGTGAAGCTGCTTGACATGATCAAGAAAGGTGCTGCTAATAGGGCTACGGATATGAATGGCACGCAGGAGAAGGTCGAAGTTCCTCTCCCATCACCAACTCCTTCAAGCAATCCAAGAGCGAGTGGATGGAAGACAGAAGGTTTGAAGAATCCTTTTGTACAGCAAACTTCGGTGCCTGACAGAATTATCCACAACTCCCCAGTAGCAGCAACAACTACTAACTCGGCGTTTTCTCAGATTCCAGCCACTGCCATTGCAGTACAACCAACAAATGTTGCTCCATATTTACTGACTCAGGCAACTGATATTGTTTCCTCTTTCATGCATGCCGTTCTCCATACCAATTCTCCAGCAATACAAACACCACCTTCTGACATAGATATAACCATGAACATTAACAGAATCACAGCAAATGCTTCATCAGCTAACTTATTCAGTGCACATTCACCTTTAGCAATGCGGGTTGATGGCATCTGCAATTTAAAACCAGTACCTAATTTGAGTACACAGGAGGGGTTTTCTAATTCATTCCCACAATCTTGCGTGTTGCCCTCACCAACACCACCAATTACAGCTACACAGCAACAAAGGCAACCAAATTTGTTGCAGACTGAGCCTCACTATCATGCTCCTTCACATTCTCATCCACCAAAAACTGAAAGACAAGGCCCTGTGTCAGATTTGTGGAGAGTTGGGCAGGATATGTCTTCCAATTATCATTCTCAAGTAAAGAGAAACAACTACAACGCAATGGATGGGGGATCCAGGCAATCTGGTTCTTCTAGGGTGAGAAATGATTATGCAGGGGAAGAATTTGAATCATGGAGTCCGCAAAATAGCCCAACTAGAGACCTTAGAAATAATTCCAGAAGAAATTTACCTGAATCCAGGATGAATCCTGAGAGGAATTTTAGGCCTGAAGGGTCAAGACAACGGGATTCTTCTGGGTTCTTGGATTCTGGTAGGCATGGTAACAGAAAGTGGCGTGATCAGAGACGATGA 3024 0.4292 MMEVQKDEFSEPEIGSSVESFQKFLVSQRELFRSQIDQFQKIFVTQCNLAGVNPLSQEMAAGALSIEIGKRPRDLLNPKAVNYMQSIFSIKDAISKKGSRELSALLGITVTQIREFFASQRATVRRLVQSSRERTMRSNSCEEDHDEVLLNSDSFRPINPAPISSAGPSSVEDASCSTQDNALSVLDDLNKHFVENIFILMRKEESFSGQEKLMEWILKIQHYSVLCWFLSGGGLMILATWLSEAAVEEQTSFLLLILKVLCHLPLQEALPAHMSAILQCVNRLQFYRTSDISNRARVLLSKWSKLLARNQTIKNPHGVKLSFDAQKEMVPNQSFGHVMGTESWHPHIDVPEDFLSLSNKSLDNLRKVESPKVVKLLPASFNDSTKKPALGVSSSQARERRKVQLVDQPGQKTLSRSPIATRVGPVSQGRPMSADDIQKAKMRALYKQGKYGKTSSSTGIKESKTDGLHKPQTNQASLVASLSEVPLSPQIKDDKKLLLIPSKVSNSPEASLDSKLRMDFKVPLWEKCMGVQIPWKTPAELKLNVGWRVGAGENSKVIDVQKNRNQREEETVYQTFQEIPSNPKEPWDLEINYNDTLTPEIPIEQQPGGDDVETLVNPSQGATLAVQVAATSFPNCDVGTAKPDLELLAVLLKNPELVFALTSGQTGGLPSQETVKLLDMIKKGAANRATDMNGTQEKVEVPLPSPTPSSNPRASGWKTEGLKNPFVQQTSVPDRIIHNSPVAATTTNSAFSQIPATAIAVQPTNVAPYLLTQATDIVSSFMHAVLHTNSPAIQTPPSDIDITMNINRITANASSANLFSAHSPLAMRVDGICNLKPVPNLSTQEGFSNSFPQSCVLPSPTPPITATQQQRQPNLLQTEPHYHAPSHSHPPKTERQGPVSDLWRVGQDMSSNYHSQVKRNNYNAMDGGSRQSGSSRVRNDYAGEEFESWSPQNSPTRDLRNNSRRNLPESRMNPERNFRPEGSRQRDSSGFLDSGRHGNRKWRDQRR 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3374 1007 MobiDBLite consensus disorder prediction 448 472 - -
Dere01g3374 1007 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Dere01g3374 1007 MobiDBLite consensus disorder prediction 962 983 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 689 720 - -
Dere01g3374 1007 Gene3D - 67 131 - -
Dere01g3374 1007 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 107 989 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 408 422 - -
Dere01g3374 1007 SUPERFAMILY Homeodomain-like 69 135 IPR009057 -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 852 871 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 946 961 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 385 433 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 879 898 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 916 938 - -
Dere01g3374 1007 MobiDBLite consensus disorder prediction 916 1007 - -
Dere01g3374 1007 SMART HOX_1 69 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3374 Dere-ChrDere01 48375666 48385239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3374 7 732 Homeobox Transcription Factor Family AT4G02560 48.354 0.0 643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3374 01 48375666 48385239 Dere01g3374 01 48375666 48385239 ECH