Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3368 ATGACAAGGAGTCGGCGGTGTCCTATGGCGGAGATGGACGATGACAGAACTCTTAGTTGGAGGTGGATGATAGATGAACCAGAAGCTTCTCTTTTCCCTCCAACTGGGGTTTTTGCCAGTTTTGCCGCACATTTCCGAGCAGGCCCCCATGTACCAGATAAGGTTGTTGAGTCAATCACAACGTTAATGCTGCCTCCGGAGATTCAAATGCAGTGGACGTTAATGCTCATCGACCCACAACGCCAGGAAACAGTGCAGGGGTTGGTCAACGAAAGTCTCGTGGCGATGGGTGTTGTTACTGTTGCTGAATTGAAGCTCAGTGTTTCAGGGAAGAGGTCCTTTCGTCCAAATTCAAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTCTCTAGCGATCTTACCGTTGAAGTAGGAGCATCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCCAAGAGTGGAAAAATTCGAAAAATCTTGTTAGAAGCAAAAGATTCGATAGTTTCGTGCATAAGTCTCCCAACTGTGCCCGGAGGAGCAGAGGCATTTGAACTAGCTGCCAAGTTCTGTTATGGAATTAACGTTGAGTTCACCCACTCCAACGTTGCTATGCTACGTTATGTTGCCCATTTTCTGGAAATGACAGAAGAAGTTGCCGAGAAAAACTTGGAGACGCGGGCTGAAGCATATCTAAAGGAGACAGTGTTGCCAAACATTTCAAGTTCAATATCTGTTCTTCATCGTTGTGAAAATCTTGTACCTGTATCAGATGATATCAACCTCGTCAACAGGCTAATCAATGCAATAACCAATAATGCTTGTAAAGAGCAGCTCACCTCGGGCTTGCTGAAACTAGACCACAATTTCCCTTCTAAAACTATCTCAAGCATGGAACCAGAAACACCCTCAGACTGGTGGGGAAAATCTCTCAATGTTCTTAACCTTGATTTCTTCCAACGGGTCCTATCTGCAATGAAGTCAAAGGGACTAAAACAGGACATGATTAGCAAGATTCTGATAAACTATGCACATAATTCTCTTCAAGGGACTGTTGTTAGGGACCCCAAAGTGGTGAAAGGAAGTTCACTGGACTTAGAGTTGCAGAAGAAACAAAGGGTCATTGTTGAAGCCATAGTTAGCTTATTACCAACTCAGTCAAGGAAAAGTCCAGTTCCGATGGCATTTCTTTCAAGTTTACTGAAAGTTGCCATTGCAGCATCAGCATCCACTTCTTGTAGGTCTGATTTGGAGAGGAGGATAGGTCTTCAACTTGACCAGGCAATTCTTGAAGACATCCTAATTCCTGCAACCTCAAGTCAGAAATCTCACTGTACAATGTATGACACTGATTCGATTATGAGGATCTTTTCCATTTTTCTAAACTTGGATGAGGAAGATGAGGATGATAGTCACTTGAGAGATGAGAGTGAAATGGTATATGACTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTGAAGGTCTCGAAGTTGTTAGACAATTATCTTGCTGAAGTAGCATTAGACTCAAACTTGTTACCATCAAAGTTCATAGCACTTGCTGAACTACTTCCAGATCATGCACGTATTGTAAGCGATGGACTCTATAGAGCTGTTGATATCTTCCTCAAGGTTCATCCAAATATAAAGGACTCAGAGCGATACCGGCTCTGTAAAACCATAGACTGTCAAAAGCTGTCTCAAGAAGCTTGCAGCCATGCAGCTCAAAATGAAAGGCTTCCAGTGCAAATGGCAGTCCAAGTTCTGTACTTTGAGCAAATACGGCTGAGAAATGCCATGAATGGGGGACCCAGCCAATTCTTCTTTGCAGGACTCAACGGTCAATTCCCTCACCGTTCAGGAAGCGGTGCTGGAAGTGGAGCCATATCCCCTAGAGATAATTATGCATCAGTGAGGAGGGAGAACAGGGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTAACAGACTTGGAGAAAGATCATGTGTCCATGAAGCAGGAGCTTGTGAAGTCTCATCCTGCGAATAAGCTATTTAAGTCATTTACGAAAAAGCTCAGCAAGCTTAATGCATTATTTCGAATTAACAATGTCAAGCCAATTGGAGGGAAAGCTGGTTCTGAAAGTCGGTTTCCTTTTCCAAAAAGAAGGCGTCACTCAGTTTCATGA 2181 0.4351 MTRSRRCPMAEMDDDRTLSWRWMIDEPEASLFPPTGVFASFAAHFRAGPHVPDKVVESITTLMLPPEIQMQWTLMLIDPQRQETVQGLVNESLVAMGVVTVAELKLSVSGKRSFRPNSSIRHATEWPISDVSSDLTVEVGASSFALHKFPLVSKSGKIRKILLEAKDSIVSCISLPTVPGGAEAFELAAKFCYGINVEFTHSNVAMLRYVAHFLEMTEEVAEKNLETRAEAYLKETVLPNISSSISVLHRCENLVPVSDDINLVNRLINAITNNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNVLNLDFFQRVLSAMKSKGLKQDMISKILINYAHNSLQGTVVRDPKVVKGSSLDLELQKKQRVIVEAIVSLLPTQSRKSPVPMAFLSSLLKVAIAASASTSCRSDLERRIGLQLDQAILEDILIPATSSQKSHCTMYDTDSIMRIFSIFLNLDEEDEDDSHLRDESEMVYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGPSQFFFAGLNGQFPHRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTKKLSKLNALFRINNVKPIGGKAGSESRFPFPKRRRHSVS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3368 726 PANTHER OS12G0117600 PROTEIN 129 679 IPR043454 -
Dere01g3368 726 Pfam NPH3 family 306 574 IPR027356 -
Dere01g3368 726 SUPERFAMILY POZ domain 120 218 IPR011333 -
Dere01g3368 726 Coils Coil 638 672 - -
Dere01g3368 726 ProSiteProfiles NPH3 domain profile. 306 598 IPR027356 -
Dere01g3368 726 Gene3D Potassium Channel Kv1.1; Chain A 121 243 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3368 Dere-ChrDere01 48273849 48281451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3368 96 548 EF-hand Containing Proteins AT2G47860 60.412 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3368 01 48273849 48281451 Dere02g0599 02 5707145 5709647 CCT
Dere01g3368 01 48273849 48281451 Dere01g3368 01 48273849 48281451 ECH