Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3347 ATGAGGCGCAAGAAGAGGATGGACGACATAGCTGCAGCGAACCAGGGGTCTTCCACCAACTCCCCAAAAAATGGTACTGGCACTCCGACATGTGAGAAAGATGATTTGTATGTTTCGCTTTGGCAAGCATGTGCCGGCCCTTCTGTCAATGTTCCTCGCGATGGAGATTTGGTTTTTTACTTTCCTCAAGGCCACTTGGAACAGGTAGCTGACTTTACTCGGCGAGATGGTCAAATTGAAATTCCTGCTTATGATTTGCCTTCAAAAATCCTTTGCAGGGTCATGGGTGTTCAACTGAAGGCCGAAGCCAACACAGACGAGGTTTTTGCTCAAATTAGTTTAATTCCAGAGTCAAAGCAAAATGAACTTAGTTCAGATCATACGGACTCTCGTCCAAGACCCAGAACTACTGCCAGCTCCTATATTAAAACACTCACTCAATCAGATACAGGATATGTCTCAGCAACCACCATCACAAGAGCTAGTTGCGAAGGACTTGCATGGTTTTATATGGAATTTTCGCCATACCTACCGTGTGGGGAAAATGGAGTTTATATTGGGATCCGTCGATCACTGAAACAACACAGCAGTGCATCCACATCCACATGTGTGATATCTGGCCATAGCATGCAACTTGGGATACTGACCAGTGCTTCTTATGCTGTTGCTACAGGATCCATGTTCACTGTTTACTACCGGCCTTGGACTAATCCTTCTGAATTTATTATTCCACTGGATCACTACCTGAAATCAACTAAAATGAGATATTTACCTGGAACGAGGATACAAATGCAGTTTGAAGCTGAAGAATCTACGAAGAGATATGCAGGTACTATAATTGGTATTGACGATATTGATGGCATAAGGTGGCCTGGTTCAGAATGGAGATGTCTCAAGGTGCAATGGGATGCCAAGCCGGAGACATATATGAGCCCTGAAAGGGTTAGTCCTTGGAAAATTGAGCCCTTGGAATCTTCCAGGAAGAACATTTCTAATCTACCCTCACCGAAGAGGCCACGTTTACCTGGCCCATCATTGCCTGGATTATGTGGTTTTACCAAGGATGACATCGATCTGAATTCAGTCAAGGATGCATCTCAGAGATCTGAAAGGGACTTACAAGGTCAAGATTACAATGAAGTAGGCTCTCAACGACATGCACAGAAGCTATTATTAACAGATATACGTCTGCCATCAAATGCCACATTATATTATTCACAGTTGAGGATGAAGAATCAGCTGCACTTTCAACTGCAAAACCCTCTTTGTCATTCTCTTGGCAGCTCAATATCCTTTCCAGATGATAACATTTCGACTTCAAGCCTCCCCAAACAGCCCCCATTCGTAACCGCTAATGAAGCATGTAATAATGTCTCTGACACCAGGTACCTTTCACTCTCAAATGTGAACTCCAATGATACTGAATCCCTGGGATGGCGGGCATCTGAATCTAGGGATGAGAATGATGTTCCTTTGGGCCAACCTGACGGATATGGCAAAACTGAATACAAGCTTTTCGGGGTTAACTTAAGCCACCCGGAGCTCCCTTCACCACAAGTTGCTGCTTCTAGCAATACTTCAAGTCTTCTTTCTGTTCCTCCAATGTCTCAGTCAAGCATTTCTGCAACTATCCCGATTTCCAAGTCAACCAAGAGTATTTCAGGTGTTACCTCTCAGAAAAAATGCAAGAAATGTTGCTCGGTTAGTAGTAGGACTTGCACAAAGGTAATTAAGCGTGGAAGTGCTCTTGGCAGATCAATTGACCTCACGCGTGTACCTGGATATAATGAACTCATTTCTGAACTGGACTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAACCAGTGGATGGCATGTGGTCCCCATAGATGACGATGGGGATATGATGCTGTTTGAAGATTACCCTTGGCAGTTAAGTAGTGAGATCAATAGCAGTATGAAAACAAGGATTATTTTTTCACTTTCGGGATTTCCAGCCTACGGTGCAAAAGATGATCATTTGTCCAAAGGAGGACTCCAACAACCTGAATACTATTGCCAGCACAACAAACTCAACGACCTTGTAATCGCTATGCAAACAAAGATGTCTTCGGGCCGTGCAGTACTTATGCAGCTATACAGTTGTTTATGA 2136 0.4349 MRRKKRMDDIAAANQGSSTNSPKNGTGTPTCEKDDLYVSLWQACAGPSVNVPRDGDLVFYFPQGHLEQVADFTRRDGQIEIPAYDLPSKILCRVMGVQLKAEANTDEVFAQISLIPESKQNELSSDHTDSRPRPRTTASSYIKTLTQSDTGYVSATTITRASCEGLAWFYMEFSPYLPCGENGVYIGIRRSLKQHSSASTSTCVISGHSMQLGILTSASYAVATGSMFTVYYRPWTNPSEFIIPLDHYLKSTKMRYLPGTRIQMQFEAEESTKRYAGTIIGIDDIDGIRWPGSEWRCLKVQWDAKPETYMSPERVSPWKIEPLESSRKNISNLPSPKRPRLPGPSLPGLCGFTKDDIDLNSVKDASQRSERDLQGQDYNEVGSQRHAQKLLLTDIRLPSNATLYYSQLRMKNQLHFQLQNPLCHSLGSSISFPDDNISTSSLPKQPPFVTANEACNNVSDTRYLSLSNVNSNDTESLGWRASESRDENDVPLGQPDGYGKTEYKLFGVNLSHPELPSPQVAASSNTSSLLSVPPMSQSSISATIPISKSTKSISGVTSQKKCKKCCSVSSRTCTKVIKRGSALGRSIDLTRVPGYNELISELDLMFDFKGSLINGTSGWHVVPIDDDGDMMLFEDYPWQLSSEINSSMKTRIIFSLSGFPAYGAKDDHLSKGGLQQPEYYCQHNKLNDLVIAMQTKMSSGRAVLMQLYSCL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3347 711 Pfam Auxin response factor 218 299 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dere01g3347 711 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 184 643 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dere01g3347 711 Gene3D - 256 329 - -
Dere01g3347 711 ProSiteProfiles PB1 domain profile. 571 657 IPR000270 GO:0005515
Dere01g3347 711 Gene3D - 566 655 - -
Dere01g3347 711 MobiDBLite consensus disorder prediction 12 28 - -
Dere01g3347 711 MobiDBLite consensus disorder prediction 1 30 - -
Dere01g3347 711 FunFam Auxin response factor 255 327 - -
Dere01g3347 711 MobiDBLite consensus disorder prediction 473 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3347 Dere-ChrDere01 48113413 48119180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3347 569 639 B3 DNA Binding Superfamily AT5G62000 52.113 2.53e-17 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3347 01 48113413 48119180 Dere01g3347 01 48113413 48119180 ECH