Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3345 ATGGAAGCTTGCCTGATAAGATATTGTTTGGCAGTTGATGTCAAAGATGCAAATAAAGATGAGTACCAGCAATTTCAGGAGACTGAGCTCTTCGAAGACACCTTAGCAAAGACAGGTGCCCCTACTTTTGGGAAATCTGTTACTGAAACCTCGACTGGTGCTGAGAGCTCATATAAGAAACATCATTTACATCCATCTACAAAGTTGAATCAAATACCCTCCGCAGGGATTGGGGAATTAACCCATGCCGATGCACTCGGCTATGTGGATCATTACTTGTTATTCAACAAAGTGGAATTATCTGAAAGAATTTGCCATAGAAAGGCCACTGGAGAGAAATCACCTCCTGTCATAAGTGCAAGAAGGGCACGAAATTTAGCTAAGAAAATTTATGTTGAGACCCATCAGGAAGAAAAAAGACCCTTCGAATGGGTTGACAGTGGTCAACAGGACAGAGGAGCTGGTATCTTTTGTAAAAAGATTAAAGCATCTTCAAATTTTGGAGTCTGTGGACAGACATATATAAGAAGACAAAAGAAAAGTGGTTATCCTGAGAACGAAGGAAACTGTAGCACAGCTAATAGATGTGAAGGGAAATTAGCGCAAGGACCCGAAGCAGTAGCTGAGATTAATAATTTTACAAAGGAGTTACATGTTCAGTCAGATGCAGCAAGAGAGGATCTTGGTGCTTATTCTGGTGTGACACTAGCAGAGGACATCTCTGATATTGGTTTGGATACCCAAATAGCTGCTGAAGCTATGGAAACCTTAGCCTATGTCCCCCCGCCTGAGAGCAAATGCACAAAGATCAAAGATCAACCAAGCAAACATGGAAAGAGGAATAATAATGTCGCGGAGGAGGGAATTCTGAGACACAAAAGGAAGAGGACTAGTTTAGTGGCCGGTCCATTCAAGTTGGTTGGTGAGGTAGAATATCCCAGGTTGCCTTCCAGTTCATTCGGGGAGGCTACAAAGTCTAGTTTGAATCATCAGGTTCTAGTTAGTCCGCACCTGTCCACAAGCAGCAGTATTTTAAGGCTTAGTTCATGGCATTATCCGAAAGGACCAAGAGGGAAAAGAAAATGTACCAATGTGCAAAGCAATCCAGATGCACATATAAATAGGTGTATTCAGTCTGTCATAATCAACGGAAAAGAAAGTGATACCCTTTCTACCGGAAGTCCCAGAAGTTGGAGAGGTTTAGAAGGCGAAGACGTATCATGTTTTCCTCACACCCGGCCACTTTATAATGCTAAATGTACCGACACGGGCGCCGTTAGGGAAGGTAGAGAGGTTTCAAATGCCGATGCTACATGCCATAAGCATCACAAAAAACCTAGTAATAAAAACCAGCCGAAATCTTCCCTTTTAAAGGAGCTTATTAGATTAGGCGTTTCTGAATTCACACCGGATCTGATAGGGAAAGATCTGAGACAACGAAGAGATATGTCATATGTTCGAGTTCTGTTTAGCCAGCATTTGGATGAGAGTATCATTAAGCAGCAAAAAAAGATCTTGGCACGGATGAACATATCTATTGCATCATGCTCAATGGAGGCTACACATTTTGTAGCAGACAAATTCACACGCACACAGAATATGTTGGAAACCATGGCTCTTGGTAAAATGGTGGTGACACATTTATGGCTTGAGTGCTGTGGACAGGCAAACTGTTTTATTGACGAGAAAAATTACATTCTACGCGATGTGAAAAAGGAAAAGGAGATGTGCTTTAGCATGCCTGTTTCTCTTACTCGAGCAAAACAGCAGCCGCTTCTGAAGGGTAAAAGAGTCTTCATCACACCGCACATTAAACCTGATAATAACGTGATTACAAGCTTGGTCACTGCAGTTCATGGCCAGGTAGTGGATGAATGCCAGATATATGCAGGCAAGAATGATAAGATATTAGATGAGCTGTTGGTTCTTTCTTGTGAAGAAGATTATGCAGAATGCCACCCGTTCCTCGAGAGAGGAATTGCTGTTTACGGTTCAGAGCTTCTTCTGAGTGGAATAGTAACCCAGAAACTGGAATTCGAGAGACATAAACTCTTCGCGAATCACGTTGGAAGGAAATACCTCATCACGTATACTCCACGTTTTGGTAAGGTTTACAGAAGGCGTCGAGACCTGCATATGAAGAACAGCTGA 2151 0.4231 MEACLIRYCLAVDVKDANKDEYQQFQETELFEDTLAKTGAPTFGKSVTETSTGAESSYKKHHLHPSTKLNQIPSAGIGELTHADALGYVDHYLLFNKVELSERICHRKATGEKSPPVISARRARNLAKKIYVETHQEEKRPFEWVDSGQQDRGAGIFCKKIKASSNFGVCGQTYIRRQKKSGYPENEGNCSTANRCEGKLAQGPEAVAEINNFTKELHVQSDAAREDLGAYSGVTLAEDISDIGLDTQIAAEAMETLAYVPPPESKCTKIKDQPSKHGKRNNNVAEEGILRHKRKRTSLVAGPFKLVGEVEYPRLPSSSFGEATKSSLNHQVLVSPHLSTSSSILRLSSWHYPKGPRGKRKCTNVQSNPDAHINRCIQSVIINGKESDTLSTGSPRSWRGLEGEDVSCFPHTRPLYNAKCTDTGAVREGREVSNADATCHKHHKKPSNKNQPKSSLLKELIRLGVSEFTPDLIGKDLRQRRDMSYVRVLFSQHLDESIIKQQKKILARMNISIASCSMEATHFVADKFTRTQNMLETMALGKMVVTHLWLECCGQANCFIDEKNYILRDVKKEKEMCFSMPVSLTRAKQQPLLKGKRVFITPHIKPDNNVITSLVTAVHGQVVDECQIYAGKNDKILDELLVLSCEEDYAECHPFLERGIAVYGSELLLSGIVTQKLEFERHKLFANHVGRKYLITYTPRFGKVYRRRRDLHMKNS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3345 716 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 284 684 - -
Dere01g3345 716 Gene3D BRCT domain 591 691 IPR036420 -
Dere01g3345 716 Gene3D BRCT domain 475 590 IPR036420 -
Dere01g3345 716 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 484 567 IPR001357 -
Dere01g3345 716 MobiDBLite consensus disorder prediction 42 61 - -
Dere01g3345 716 SUPERFAMILY BRCT domain 479 583 IPR036420 -
Dere01g3345 716 ProSiteProfiles BRCT domain profile. 507 567 IPR001357 -
Dere01g3345 716 CDD BRCT_PAXIP1_rpt6_like 592 678 - -
Dere01g3345 716 CDD BRCT_MDC1_rpt1 486 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3345 Dere-ChrDere01 48105319 48108531 Dispersed/Wgd