Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3339 ATGAGGTCTGAATTCTTCTTACTAGGTTGTGTGGTACTTTTTGCTTCTCTTGTGGTAGGACAAGGAGGCGACCTCAGGAAGAACTTCTACCGAGATTCCTGTCCTAAAGCTGAGGACATTATTAAGACAAGAACCACTCAGCTTGTCTCTTCTGATCCTGGCTTGCCAGCCAAGTTGCTGAGAATGCACTTTCATGACTGCTTTGTTAGGGGTTGTGATGCCTCAGTTCTGTTGAACTCCACCGCTGGTAATACTGCAGAAAAGGATGCAATTCCTAATCTAACTCTGGCAGGCTTTGGAGCCATAGATGACATAAAAGCAACTGTGGAGGCCCAATGCCCAGGAGTTGTTTCCTGTGCTGACATCCTCGCGTTGGCTGCTAGGGACTCTGTTTCCATCCCTTTTAACAACCCTTTATGGGAAGTGCTTACTGGTAGAAGAGATGGGAGGGTGTCAATAAGTGCAGAAGCGTTGGTGAACATTCCAGCACCATTCTTCAACCTCAACCAACTGAGAGCCAGCTTTGCCAGTAAGAACCTGACCCTCCACGATCTGGTGGTGTTGTCAGGCTCACACACAATCGGAATAGCCCATTGCAACTCCTTCAGCACGAGGCTCTACAACTTCACCGGAAAAGGCGATCAGGACCCTTCTCTGGATGCCACCTATGCTGAGTTCCTCAAGTCAAAATGCAAGAGCCTCAGTGACACCACCACGACCGTAGGAATGGATCCTAACAGTTCTACCTCGTTTGACTCTAACTATTACTCCAACCTTCTTCAGAACAAGGGGCTGTTCCAGTCAGACGCTGCCCTTCTAACCATTAAGCAGTCCAGGAATATTGTCAACGAATTGGTCGACCAACAGGATTTCTTCACTGAGTTCTCGCAGTCCATGAAGAGGCTCGGAAACGTTGAGGTCCTCACCGGCACGAGTGGAGAAATCAGGAAGAAATGTTGGGTTGTTAACTCTTAA 975 0.481 MRSEFFLLGCVVLFASLVVGQGGDLRKNFYRDSCPKAEDIIKTRTTQLVSSDPGLPAKLLRMHFHDCFVRGCDASVLLNSTAGNTAEKDAIPNLTLAGFGAIDDIKATVEAQCPGVVSCADILALAARDSVSIPFNNPLWEVLTGRRDGRVSISAEALVNIPAPFFNLNQLRASFASKNLTLHDLVVLSGSHTIGIAHCNSFSTRLYNFTGKGDQDPSLDATYAEFLKSKCKSLSDTTTTVGMDPNSSTSFDSNYYSNLLQNKGLFQSDAALLTIKQSRNIVNELVDQQDFFTEFSQSMKRLGNVEVLTGTSGEIRKKCWVVNS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3339 324 Gene3D Peroxidase, domain 2 162 302 - -
Dere01g3339 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Dere01g3339 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 FunFam Peroxidase 28 167 - -
Dere01g3339 324 PANTHER PEROXIDASE 25-RELATED 14 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 Gene3D - 28 323 - -
Dere01g3339 324 FunFam Peroxidase 162 302 - -
Dere01g3339 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g3339 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3339 Dere-ChrDere01 48065825 48066970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3339 5 324 Peroxidase AT1G05260 53.870 6.90e-120 346