Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3334 ATGAGCTCGAAGCCGTGGCTGCACCCAGCTCCGACTTATCGAAGAGTTGAGACCAAATGGGACAATGATGAAGACGCTCCTGGCCCACGCTGCAGTCACACACTCACCGCCGTGGCGGCGACCAAGTCACACGGTCCCCGCTTAATCCTCTTCGGCGGCACCACCGCCATCGAAGGAGGCTCTTCGTCTGCTCCCGGCATTCGATTAGCGGGAGTCACAAATTCAGTTCATTCCTATGACGTTCTTTCAAGAAAATGGACTAGAATACGACCTGCTGGAGAGCCACCCTCCCCTCGGGCTGCTCATGCTGCAGCTGCTGTTGGTACTATGGTCGTTTTTCAGGGCGGGATAGGTCCTGCTGGCCATTCCACTGATGATCTCTATGTGCTTGATTTGGCCAATGATAAATTCAAGTGGCACAGAGTCGTTGTACAAGGACAAGGACCTGGCCCTTGCTATGGCCACGTAATGGACTTGGTTGCTCAGAGATATCTGGTTACTGTCAGCGGAAATGATGGTAAAAGGGTTCTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGCATGGCAGAGGCTGAACCCAGAAGGTGATAAACCTTCTGCTAGAATGTATGCAACTGCCAGTGCTCGTTCAGATGGCATGTTTTTGCTTTGTGGTGGAAGAGACACTTCTGGAGCACCCTTGGCAGATGCCTATGGACTACTCAAGCATCGGAATGGTAAGTGGGAATGGACCCTTGCACCAGGAGTTTCACCTTCTCCGAGGTACCAGCATGCTGCAGTTTTTGTTGGAGCAAGATTGCATGTGGTCGGAGGTGTTCTCAGGGGAGGGCGCCTGGTAGAAGGGGAAGCAGCCATTACAGTATTGGACACTGCCGCTGGGGTTTGGCTGGACAGAAATGGCCTGGTAACCTCCTCATGCACAAAAAAACGTCATGGTCATGACCCTTCTTTGGAGCTTATGCATCGATGCCGCCATGCGGCAGCTGCTGTTGGTGGTTGTATATATATTTTTGGTGGTCTCAAAGGAGATATGCTGCTAGATGATTTATTAGTGGCTGAAAATTCGCCAAATCAGTTTGAAATTGACTATCCTATTTTAACGTCTGAGAGAGCTTCACCTGTTATGAGTCCAAAATGGAATCAGTCTAATGTAACAGCACCAATTGTGGGTGGTGAACCAGGCATCCTGTCTCCTGGGGTCATGGGAGTGGGCATGGACAATGACTCTATTGAGAAACTGAGGGAAGCATCTGCTGCTGAGGCAGAGGTGGCAAATGCTGTCTGGCAAGCTATGCAGGCTGTATCAAGCAATCCAGCTGAAGAAACATATGTATCAGATGACAACCCACAAGCTACAGAAACAGCTTCAGATGGCAGTGACACAGAGGGAGATGTTCGCCTTCATCCCCGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTGGGTGGAATGGTGAGACAGTTATCACTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCTATAAATAATGATTTGCCTTATCCTGTGAAAAAGTTCACCAGGCAGAAATCTCCCCAGGGTTTACATAAAAAGATAATTTCTACGTTGCTCAGACCTCGGAACTGGAAAGCTCCAACAAACAGGCCGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGTTATGCTGCTGAGCAGATATTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCGCCGGTCAAAGTATTTGGTGATCTTCATGGACAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACTGCAGGAGACATAACATATATTGACTACCTATTTTTGGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACGATTACCTTGCTTCTTGCTCTTAAGATTGAGTATCCTGAGAATGTTCACCTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAATGCATGGAAAGAATGGGAGAAAATGATGGAATATGGGCTTGGACCCGGTTCAATCAACTTTTCAACTATCTTCCACTTGCTGCTCTTATTGAAAAGAAAATTATCTGTATACATGGTGGCATTGGAAGGTCTATCCATTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCTATCACAATGGATGCGGGATCAATAGTTTTAATGGACCTTCTATGGTCTGATCCCACAGAGAACGACAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTTACTTTTGGGCCTGACCGTGTCACAGAATTCTGTAAGAAAAATAAATTACAGCTTATTATAAGGGCTCATGAATGTGTCATGGATGGTTTCGAGAGATTCGCCCAGGGACAATTAATAACTCTTTTTTCTGCAACTAACTACTGTGGAACGGCAAACAATGCTGGAGCTATACTGGTTGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCTTACCACCTCCCGTTCAGTCTTTAGAGACATCTCCTGAGCGTGTCAAGGAAGAGGCATGGATGCAGGAGCTTAATATTCGGAGGCCACCAACTCCTACTAGGGGTCGACCCCAGCCTGATCATGACCGTAGCTCACTGGCATACATATGA 2652 0.4676 MSSKPWLHPAPTYRRVETKWDNDEDAPGPRCSHTLTAVAATKSHGPRLILFGGTTAIEGGSSSAPGIRLAGVTNSVHSYDVLSRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLANDKFKWHRVVVQGQGPGPCYGHVMDLVAQRYLVTVSGNDGKRVLSDAWALDTAQKPYAWQRLNPEGDKPSARMYATASARSDGMFLLCGGRDTSGAPLADAYGLLKHRNGKWEWTLAPGVSPSPRYQHAAVFVGARLHVVGGVLRGGRLVEGEAAITVLDTAAGVWLDRNGLVTSSCTKKRHGHDPSLELMHRCRHAAAAVGGCIYIFGGLKGDMLLDDLLVAENSPNQFEIDYPILTSERASPVMSPKWNQSNVTAPIVGGEPGILSPGVMGVGMDNDSIEKLREASAAEAEVANAVWQAMQAVSSNPAEETYVSDDNPQATETASDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPINNDLPYPVKKFTRQKSPQGLHKKIISTLLRPRNWKAPTNRPFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECMERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICIHGGIGRSIHSVEQIEKLERPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPVQSLETSPERVKEEAWMQELNIRRPPTPTRGRPQPDHDRSSLAYI 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3334 883 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 7 883 - -
Dere01g3334 883 Pfam Kelch motif 96 133 - -
Dere01g3334 883 SMART pp2a_7 552 838 IPR006186 GO:0016787
Dere01g3334 883 Pfam Serine-threonine protein phosphatase N-terminal domain 531 578 IPR031675 -
Dere01g3334 883 ProSitePatterns Serine/threonine specific protein phosphatases signature. 649 654 IPR006186 GO:0016787
Dere01g3334 883 FunFam Serine/threonine-protein phosphatase 9 192 - -
Dere01g3334 883 Gene3D - 4 228 IPR015915 GO:0005515
Dere01g3334 883 SUPERFAMILY Kelch motif 73 364 IPR015915 GO:0005515
Dere01g3334 883 MobiDBLite consensus disorder prediction 442 462 - -
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 648 672 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 716 743 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 776 796 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 615 642 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 580 607 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 686 712 IPR006186 GO:0016787
Dere01g3334 883 PRINTS Serine/threonine phosphatase family signature 798 814 IPR006186 GO:0016787
Dere01g3334 883 PIRSF STPPP_BSU1 1 883 IPR012391 GO:0004721|GO:0009742
Dere01g3334 883 Pfam Kelch motif 326 346 IPR006652 GO:0005515
Dere01g3334 883 MobiDBLite consensus disorder prediction 855 883 - -
Dere01g3334 883 FunFam Serine/threonine-protein phosphatase 517 856 - -
Dere01g3334 883 Pfam Calcineurin-like phosphoesterase 580 787 IPR004843 GO:0016787
Dere01g3334 883 Gene3D - 518 857 IPR029052 -
Dere01g3334 883 Gene3D - 240 380 IPR015915 GO:0005515
Dere01g3334 883 SUPERFAMILY Metallo-dependent phosphatases 534 842 IPR029052 -
Dere01g3334 883 MobiDBLite consensus disorder prediction 442 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3334 Dere-ChrDere01 48024623 48034081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3334 545 779 Calmodulin-binding Proteins AT5G63870 29.889 8.05e-28 112