Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3329 ATGACAAAAAAAGTTGCCGTCACGCGCTACTCGCTAGCGGACAAAGCACGTGTCACGCTCAATGGCAGTTTGGAGGTATTGCTGGAGGCACGAGGGTATTACGGGGAATTGACGCAAAAGTGTGGAAAGGGAAGACGGAAAGCTTTTTGTCGCAACGTGCCTTGGCGTCGGCCGCACGCAGGAAACTCTTTGTCTCCTTGCCCCTCCTCTTTCCATCAACATTTTCCTTTTACGAATTACTATTCCCACTCCAAGGTTTTTACTACTTCCACGCCAATATGCAAAATAGAGAGTAAAACAGACATGGCTGGTAGTAATGAAGTCAACCTTAATGAATCCAAGTGTGTTGTTCCACTCAATACTTGGGTTCTCATCTCCAATTTCAAGCTGGCCTACAATCTCCTTCGTCGCGCAGATGGAACATTCAACCGTGAGCTTGCTGAGTTCCTTGACCGGAAGGTCCCTGCCAACACAATTCCAGTCGATGGAGTATTCTCTTTCGACCATGTCGATCGAAACACTGGCCTCTTCAATCGAGTTTATCAACCAGCTCCTGAAAACGAGGCTCAGTGGGGCTACATAGAGCTTGAAAAGCCCCTGAGCACCACCAAGGTCGTCCCAGTCATAATCTTCTTTCATGGTGGAAGCTTCTCTCATTCCTCGGCCAATAGCGCCATCTATGACACTTTCTGCCGCCGCCTTGTCAACATTTGTAAGGCTGTTGTAGTCTCTGTGAACTACCGCCGTTCGCCTGAACATCGTTATCCCTGTGCCTATGATGATGGCTGGGCTGCACTAAAATGGGTTAAATCAAGAACATGGCTTCAGAGTGGAAAGGATTCCAAGGTTCATGTGTACTTAACTGGGGATAGTTCTGGAGGTAATATCGCTCACCACGTGGCTGTGAGGGCAGCTGAGGAGGATGTTGAGGTTTTGGGTAACATTCTTCTTCATCCATTGTTTGGTGGGGAGAGGAGGACAGAGTCTGAGAAGAGACTAGATGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGACAGAGACCATCCTGCTTGTAACCCTTTCGGTCCCAGAGGGAAGAGCCTTGAAGGACTCAGGTTTCCTAAAAGTCTTGTATGTGTGGCTGGTTTGGACCTTCTCCAAGATTGGCAATTGGCATTTGTGGAAGGTCTCAAGAATTCTGGCCAAGATGTCAGGCTCCTTTATTTGAAAGAGGCTACGATCGGTTTCTACTTCTTGCCGAATAATGATCATTTCTATTGCCTCATGGAGGAGATAAACAACTTCGGATTATTACTTACGGTCGTAACATCTATGGTGGTTAAATTGGACTCTTGCCTGCCCATGTCTTTCTGA 1389 0.473 MTKKVAVTRYSLADKARVTLNGSLEVLLEARGYYGELTQKCGKGRRKAFCRNVPWRRPHAGNSLSPCPSSFHQHFPFTNYYSHSKVFTTSTPICKIESKTDMAGSNEVNLNESKCVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQPAPENEAQWGYIELEKPLSTTKVVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVHVYLTGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGERRTESEKRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLEGLRFPKSLVCVAGLDLLQDWQLAFVEGLKNSGQDVRLLYLKEATIGFYFLPNNDHFYCLMEEINNFGLLLTVVTSMVVKLDSCLPMSF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3329 462 SUPERFAMILY alpha/beta-Hydrolases 174 437 IPR029058 -
Dere01g3329 462 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 209 225 IPR002168 GO:0016787
Dere01g3329 462 Gene3D alpha/beta hydrolase 97 441 IPR029058 -
Dere01g3329 462 PANTHER ARYLACETAMIDE DEACETYLASE 139 416 - -
Dere01g3329 462 FunFam Gibberellin receptor GID1 102 442 - -
Dere01g3329 462 Pfam alpha/beta hydrolase fold 209 422 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3329 Dere-ChrDere01 47992259 47995561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3329 102 440 Carbohydrate Esterase AT3G63010 78.529 0.0 575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3329 01 47992259 47995561 Dere02g1290 02 12330975 12333527 CCT
Dere01g3329 01 47992259 47995561 Dere01g3329 01 47992259 47995561 ECH