Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3290 ATGACTTGGCAATCCGCAAATGTCCATGAGCTGTCCATTGCTAAGCTTGCGTTTTACAGTGCATCGCAGACATTGTCACAATCCCCAACTGTTTACCTGAGGAAAGGCAAATTTGCTAAACTCGCATTTGCCCATTTGGGAATCAGAGAGCGAGGCACTAGCATTACTAATATCCCGTCAGATGGGTATAATTTGCAACATTGCTGCTGGGTTGAATGCTTTACTGGATACCTGGACTGGAAAATCCCACTTCATATCAACCTTGAAAAACACACCTCAGTTATTGCTTTTGCTATGATATTCTTTGAGACTATCATGAGGAATGAGGTATTGACCAACGATGATGTTTTGGGAGTTCCTGTACCTTCAAATCAACTGCATGCAATGCGACAAGAATGTTACCAGCTGCTTAAGTTGGGCAAAGGGGACTATTTTGTTTTCGGCACGTCATGTTTTAAATTTCCACAATTGACTTGGATGGGGAAGATGAAATCTGTAATTGACGCTTCTGGAGAATTAGTTCGGGACAATCTACAACTCTTAAGACAGCGGTATTACTATGCCACATGGAAAGCTGATGGGACACGATATATGATGCTGATCACTTGGGATGGATGTTATTTGATTGACAGAAAAATTCATTTCCGAAGGGTACAGATGCGGTTTCCTTGCAGATATTTGAATGGGTATGCAGATTCTATATGTAAACTGTCTGACTTCACAGCATTGCAACAGCATAAGCATGACCATGTACCATATCCTTATATTGGCTCTCCCATGTTATACATGAGAAGAACGCTTAGGGCAGAGGTCTATCAGGAAAAGCAGCAGATTGAAAATATTTAA 846 0.4113 MTWQSANVHELSIAKLAFYSASQTLSQSPTVYLRKGKFAKLAFAHLGIRERGTSITNIPSDGYNLQHCCWVECFTGYLDWKIPLHINLEKHTSVIAFAMIFFETIMRNEVLTNDDVLGVPVPSNQLHAMRQECYQLLKLGKGDYFVFGTSCFKFPQLTWMGKMKSVIDASGELVRDNLQLLRQRYYYATWKADGTRYMMLITWDGCYLIDRKIHFRRVQMRFPCRYLNGYADSICKLSDFTALQQHKHDHVPYPYIGSPMLYMRRTLRAEVYQEKQQIENI 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3290 281 PANTHER MRNA-CAPPING ENZYME 85 247 - -
Dere01g3290 281 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 176 225 - -
Dere01g3290 281 Gene3D DNA ligase/mRNA capping enzyme 112 235 - -
Dere01g3290 281 Pfam mRNA capping enzyme, catalytic domain 174 226 IPR001339 GO:0004484|GO:0005524|GO:0006370
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g3290 Dere-ChrDere01 47673195 47676886 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3290 103 234 Protein tyrosine phosphatase (PTP) family AT5G01290 49.624 2.60e-31 120