Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3264 ATGCTGGTTGATGGTTTTGCCTGTGAACTCTGGTCACTGGTAATGAATGAAAGGCTTTTATTTGGAAAATCTACCGAGCTCGCAAAAGCAACGGATAGGAGCCAGAAGTCGGAAACAATCAACGGGATGACTGTTCAGCTATCTGGCTCGTGGTTGTCCAACTCTCCGAGAATACCTGTAAAATTTCTACCAGGTGGAGGCAGACTATACCCAACAGCTCGCGCAACCTCAGCAACCCTCTCTTCTCAATCGCCCACCATTCAGATAGTTGGAGTGAAAGGTCCTAGTTGGCGTGAAAATGGATATGCCAATTCCAACACATTTGATGGTGGACACGGGGAGAGCAGTTGGACTGATATTGACACTGATCTTTATCGCTGGACAAAGGCAATACGGCCAGTGCAGTGGTTTCCCGGTCATATTGCAAAAGCAGAAAAAGAACTTAAGGAGCAGCTCAAATTGATAGACGTTGTGATAGAAGTACGGGATGCTCGCATTCCTATGTCCACAAGTCATCCACAGATGGATTTGTGGCTTGGTAATAGAAAGAGAATTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGACCGCAATGCCTGGGCAGCATATTATGCTGGACAAGGCATAAAGGTTGTTTTCTCCAATGGGCAACTTGGAATGGGCACAATGAAGCTAGGCAGGTTAGCAAAGACATTGGCAGCTGATGTAAATGTCAAACGTAGAGCCAAAGGTCTACTCCCTCGGCCGGTTCGAGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCTCTAATTAACCGTTTGCTAAAGCGGAGACTGTGTCCAGCAGCTCCCAGGCCAGGAGTTACTAGAGAATTGAGGTGGGTTCGTTTTGGGAAAGATCTTGAATTGTTGGACTCTCCTGGGATACTCCCAATGCGAATCAGCGATCAGTCAGCTGCAATAAAACTCGCCATATGTGATGACATTGGAGAAAGATCCTATGATGTTGCTGATGTTGCTGCAATTCTTGTACATATGCTTACAAGGCTCCCTCTGGTAGGTGCAGATGCTCTTCGTAAACGGTACAGGATTGATGTAGATGGTCTCTCTGGTAAAATATTTGTTGAAAAGCTTGCACTTCATGTATTTAATGGTGATGTCCATCAGGCAGCCTTCCGCATTCTGGCAGATTTTCGGAAAGGTAAATTTGGATGGACTGCATTGGAGAGGCCTCCCAGTGATTTCTTGCATGAGGAATCTTCAATGCAAAAGCATGTGAAAAAAAATCATCACAATCTTTATATGGTTACAGGTACAAGTTTACAGATGGGGAAAAACAATGAACCAGGAGAAAGAGAGAGAAGAAAGCATAACCTTCCATCGCAATGTCCCTAA 1386 0.4437 MLVDGFACELWSLVMNERLLFGKSTELAKATDRSQKSETINGMTVQLSGSWLSNSPRIPVKFLPGGGRLYPTARATSATLSSQSPTIQIVGVKGPSWRENGYANSNTFDGGHGESSWTDIDTDLYRWTKAIRPVQWFPGHIAKAEKELKEQLKLIDVVIEVRDARIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYYAGQGIKVVFSNGQLGMGTMKLGRLAKTLAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRLCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVHMLTRLPLVGADALRKRYRIDVDGLSGKIFVEKLALHVFNGDVHQAAFRILADFRKGKFGWTALERPPSDFLHEESSMQKHVKKNHHNLYMVTGTSLQMGKNNEPGERERRKHNLPSQCP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3264 461 MobiDBLite consensus disorder prediction 444 461 - -
Dere01g3264 461 Gene3D - 312 400 IPR023179 -
Dere01g3264 461 MobiDBLite consensus disorder prediction 437 461 - -
Dere01g3264 461 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 123 417 - -
Dere01g3264 461 NCBIfam ribosome biogenesis GTPase YlqF 134 406 IPR019991 -
Dere01g3264 461 PRINTS GTP1/OBG GTP-binding protein family signature 254 274 IPR006073 GO:0005525
Dere01g3264 461 PRINTS GTP1/OBG GTP-binding protein family signature 300 315 IPR006073 GO:0005525
Dere01g3264 461 FunFam DAR GTPase 3 chloroplastic 134 307 - -
Dere01g3264 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 323 IPR027417 -
Dere01g3264 461 Pfam 50S ribosome-binding GTPase 254 323 IPR006073 GO:0005525
Dere01g3264 461 FunFam Mitochondrial GTPase 1 312 400 - -
Dere01g3264 461 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 145 309 IPR030378 GO:0005525
Dere01g3264 461 Gene3D - 134 307 IPR027417 -
Dere01g3264 461 CDD YlqF 136 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3264 Dere-ChrDere01 47443482 47448502 Dispersed