Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3253 ATGACCACAATACGCAGGTTTTGCTGTAACGATCTCCTTCGTTTTGCTTCCGTTAATCTTGACCATCTCACTGAAACTTTTAACATGTCCTTCTACTTGACCTACCTTGCAAGATGGCCCGACTATTTCCATGTTGCCGAAGGTCCAGGAAACCAAATCATGGGTTACATTATGGGGAAAGTGGAGGGGCAAGGAGAGTCTTGGCATGGTCATGTCACAGCAGTAACCGTAGCCCCAGAATATCGTCGGCAGCAGTTAGCCAAGAAACTGATGAATCTTCTGGAAGACATTAGTGACAAGATTGACAAGGCTTACTTTGTGGATCTTTTTGTGAGAGCATCAAACACACCAGCCATAAAGATGTACGAAAAGCTTGGCTATGTGATATATCGGCGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCATTGTCTCGTGATGTTGAAAAGAAGTCCATCATCCCTCTTAAACGGCCTATCACTCCTGATGAATTAGAGTATGACTAA 525 0.44 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYLTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPITPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3253 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Dere01g3253 174 Pfam Acetyltransferase (GNAT) family 38 127 IPR000182 GO:0016747
Dere01g3253 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Dere01g3253 174 Gene3D - 2 162 - -
Dere01g3253 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Dere01g3253 174 CDD NAT_SF 43 97 - -
Dere01g3253 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere01g3253 Acetyltransf_1 7.8e-15 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3253 01 47298674 47303188 Dere01g3253 01 47298674 47303188 ECH