Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3245 ATGCCAAACTCAATAGGAAGAAATCTGAACCTGTGCTTCTCAAGGATGATGCGGCCATTGTCATCTGAATCTCCGTCTTCCAGGTCTCATCGTGATCAGAACCTTGCGTCACCCACCACCACCACCAACACCAAAAGTATACTGATAAAGAACTTCAACACGCTCTATGACCCAACCTTGGACCCCGATGAGCCGGACTTGGCCACCGCCTTCGCCTCCCGACGCTTCTTCTTCTCTTCTCCCGGCCGCTCCAACTCCATCGTCGAGTCCTCCGCCAACAAGAAGGTGTTCAACGACAGCGTGGCCGTCCCCACCTACTCGCCGGACCCATATGTGGACTTCCGACGCTCAATGCAGGAGATGGTGGAGGCACGTCCCGAGCTCAGGGACGTCAATTCCAACTGGGAAATCTTGCACGAGCTTCTTCTCTGCTATCTTGCTCTCAACCCCAAACACACCCACAAGTACATAGTGGGTGCTTTTGCCGATCTTCTCATCACCCTCATGCCGTCGCCGCGCCCCCATTCCGACGACCTCGCCGCCACACAATGA 552 0.5525 MPNSIGRNLNLCFSRMMRPLSSESPSSRSHRDQNLASPTTTTNTKSILIKNFNTLYDPTLDPDEPDLATAFASRRFFFSSPGRSNSIVESSANKKVFNDSVAVPTYSPDPYVDFRRSMQEMVEARPELRDVNSNWEILHELLLCYLALNPKHTHKYIVGAFADLLITLMPSPRPHSDDLAATQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3245 183 NCBIfam uncharacterized plant-specific domain TIGR01568 101 169 IPR006458 -
Dere01g3245 183 MobiDBLite consensus disorder prediction 20 42 - -
Dere01g3245 183 ProSiteProfiles OVATE domain profile. 103 167 IPR006458 -
Dere01g3245 183 Pfam Transcriptional repressor, ovate 107 168 IPR006458 -
Dere01g3245 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 168 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3245 Dere-ChrDere01 47225754 47226305 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere01g3245 Ovate 7.7e-25 No_clan