Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3222 ATGGATAGGACCTGGAGGAGAAACAATGAAAACGAAAGCAAGGAAAGCATAGCATACAAAGAGTGGACGATAGAGGGGAAGAGAACAGAGGCAGACTGCGCTGGTAAGGGATCATGGGTCCTCGTAGACCATCAGCAAGAAGTTCCGCCAAAGAAAGTGGTTGGCCCATATTTTGCTTTAAGAAATAGGACCATGTCATTGTCACCTAATTTGAATCTCCTTTACTATGTGTACCCGTCGGGGATGAACATGGAGGGGAGTGGTCCGCGCGTGGCCATTCCACCGCCTCAGCCATTTATGAAGTCTCTCAAGTTCTCTCTGAAGGAGACCTTCTTTCCAGATGACCCTTTGAAGCAATTCAAAAACCAGCCACCTTCTAGAAGGCTCCTGCTTGGCCTTCAATACTTCTTTCCCGTCTTTGAATGGGCACCTCGCTACACTCTCAGCTTCTTCAAGTCTGACCTCATAGCTGGCATCACCATAGCTAGCTTGGCTATTCCTCAAGGTATCAGTTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTCTATTCAAGCTTCGTACCACCATTGATTTATGCAATGATGGGTAGCTCGAGGGATTTGGCAGTGGGAACAGTGGCGGTTGGGTCGCTTCTACTGGCCTCTATGTTGCAGCATTCGGTTAATCCCAACGACGACCCCAAGCTTTATCTTCACCTTGCTTTCACTGCTACATTCTTCGCCGGGATTTTGCAGGCTTCCTTGGGTTTGTTTAGGTTAGGGCTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGTGGAGCAGCAACAGTGGTTTGCCTGCAACAGCTGAAATCGATTCTGGGACTGGAGCATTTTACGCATGACGCCGATATTGTCTCAGTAATGCGCTCCGTTTTTAGCCAAACACATGAGTGGAGGTGGGAAAGCGCTGTGTTAGGGTGTTGCTTCATTTTCTTCTTGCTTCTCACCCGATACTTCAGCAAGCGAAAACCCAAATTCTTCTGGGTGTCAGCAATGACACCATTGACGTCCGTTATCTTAGGAAGTCTGCTGGTTTATCTCACTCATGCCGAGAAGCACGGTGTTCAAGTGATAGGAGAGTTAAAGAAGGGATTAAATCCACCATCTCTGAAAGATATGGTATTTGTGTCACCTTACATGACCACTGCTATTAAAGCTGGCCTTGTCACCGGCATTATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGAACTACCATATTGATGGCAACAAAGAGATGATAGCTCTTGGGACCATGAACATAGTTGGTTCTCTCACCTCCTGCTACCTCACTACAGGGCCATTTTCCAGGTCAGCTGTGAACTACAATGCAGGATGCAAGACAGCAGTATCAAACATTGTAATGGCAATTGCAGTGATGATGACATTGTTATTCTTGACACCCTTGTTCCATTACACTCCATTAGTGGTGCTCTCTGCCATAATTGTATCAGCAATTCTCCCCCTCATAGATTACCAAGGAGCCATCCATCTTTGGAAGATTGACAAATTTGATTTCTTAGTGTGCATAAGTGCTTATGTTGGTGTTGTCTTTGGCAGTGTCGAAATTGGCCTTGTCATAGCCGTATGTATTTCTGTGCTTAGGGTACTGCTATTTGTTGCAAGGCCAAGGACGTTTGTTTTGGGCAAAATTCCAAGCTCTGTTGTGTACAGAAATGTTGAACAATATCCAAATGCCAGTCATGTTCCAGGAATACTCATTCTAGAGATCGATGCACCAATTTACTTTGCCAATGCAAACTATTTAAGGGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGAGAGGATCAAAGCTACAGGAGAAACCAACTTGCAGATTGTAATAATGGATATGACTACTGTCGGGAACATTGATACAAGTGGAATAAGCATGCTTAAAGAGGTGAAGAAGATTGCAGATAGAAGAGGGTTGCAACTTGTTGTGGTCAATCCTGGAAGCGAGGTGATGAAGAAGCTCAATAAATCCAAGTTCATTGAGGATATAGGCCAGAAATGGGTCTTTTTGACAGTTGAAGAGGCAGTTAGAGTATGCAACTACGTGCTTCATACACGCAGCTTAAACCCTAGGAAAGATGAATCAGAAGCTTGGAGCAATGTTTGA 2184 0.4505 MDRTWRRNNENESKESIAYKEWTIEGKRTEADCAGKGSWVLVDHQQEVPPKKVVGPYFALRNRTMSLSPNLNLLYYVYPSGMNMEGSGPRVAIPPPQPFMKSLKFSLKETFFPDDPLKQFKNQPPSRRLLLGLQYFFPVFEWAPRYTLSFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYAMMGSSRDLAVGTVAVGSLLLASMLQHSVNPNDDPKLYLHLAFTATFFAGILQASLGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHDADIVSVMRSVFSQTHEWRWESAVLGCCFIFFLLLTRYFSKRKPKFFWVSAMTPLTSVILGSLLVYLTHAEKHGVQVIGELKKGLNPPSLKDMVFVSPYMTTAIKAGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIALGTMNIVGSLTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMAIAVMMTLLFLTPLFHYTPLVVLSAIIVSAILPLIDYQGAIHLWKIDKFDFLVCISAYVGVVFGSVEIGLVIAVCISVLRVLLFVARPRTFVLGKIPSSVVYRNVEQYPNASHVPGILILEIDAPIYFANANYLRERITRWIDEEEERIKATGETNLQIVIMDMTTVGNIDTSGISMLKEVKKIADRRGLQLVVVNPGSEVMKKLNKSKFIEDIGQKWVFLTVEEAVRVCNYVLHTRSLNPRKDESEAWSNV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3222 727 PANTHER SULFATE TRANSPORTER 102 705 IPR001902 GO:0016020|GO:0055085
Dere01g3222 727 CDD STAS_SulP_like_sulfate_transporter 583 698 - -
Dere01g3222 727 Gene3D STAS domain 577 710 IPR036513 -
Dere01g3222 727 Pfam Sulfate permease family 151 531 IPR011547 GO:0016020
Dere01g3222 727 FunFam Sulfate transporter 31 562 708 - -
Dere01g3222 727 SUPERFAMILY SpoIIaa-like 584 705 IPR036513 -
Dere01g3222 727 ProSiteProfiles STAS domain profile. 582 705 IPR002645 -
Dere01g3222 727 ProSitePatterns SLC26A transporters signature. 180 201 IPR018045 GO:0008271|GO:0008272
Dere01g3222 727 Pfam STAS domain 583 701 IPR002645 -
Dere01g3222 727 NCBIfam sulfate permease 138 701 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3222 Dere-ChrDere01 47055700 47064543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3222 90 711 Inorganic Solute Cotransporters AT4G02700 66.934 0.0 875