Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3207 ATGATAGCTAGTAGCCTAAGATGCATTGCATTCTCGTACACGCAAAATTCAAAAAGTGAACAAATTCTTAAAGAAGATTGGTTGACCTTGCTAGGAATTGTTAGTCTCAAGGATCCATGTCGGCCAGATGTGAGGAAGGCAGTGGAAGCTTGCAGGCTTGCTGGAGTAGAGATAAAGATGATCACTGGAGATAACATATTCACGGCAAAGACAATAGCAACAGAGTGTGGAATACTAGACCTTGGCAACCAAGTAAACACAGGAGAAGTAGTAGAAGGTGTGGAATTCCAGAACTACACAGATGAAGAGAGAATGCAGAAAGTTGAGAAGATCCGTGTGATGGCAAGATCATCCCCTCTTGACAAATATCTCATGGTAAAATGCTTGAAACAGAAAGGCCATGTAGTTGCAGTCATAAGAGATGGCACAAACGATGCACCTGCTCTAAGAGAGGCCGATATAGGACTTTCTATGGGCATCCAAGACACTGAAGTTGCCAAGCAAAGCTCTGACATCGTCATCTTGGATGACAACTTCAGTTCTGTAGCCACTATTTTAAGTTTTCAATGGTTCAACTCATGGAATATGGAAGAAAACAATGTGTTCAAAGGCACCCACAACTTGTTTCTTCGTATAGTGGGTATACCTAATGTTCTTCAAATTGTGATGGTGGAATTCCCAAAGAAGTTTGCTGATGCTCAGAGATTAACATGGGAGCAAGGGAGAGTTTGTATTGCAATTGCTGCTGTGTCATGGCGAATTGGTTGGACAGTAAAATTCATACCTGTTTCTGAGAAACCCTTTTTCAGTCACACCAAGAGTCTCTATTCATTAGTCATTCGGATTAAGCAAGCATTCTGCCTCAAGATCCATGATGCCATTGGGAAACAAGACAGTTTTTTGGCGTTCTGTGTTGATGAAAACGTAAAACAGAAACAGGATTCTTATGTTTTGAGCAACTCGTAG 966 0.413 MIASSLRCIAFSYTQNSKSEQILKEDWLTLLGIVSLKDPCRPDVRKAVEACRLAGVEIKMITGDNIFTAKTIATECGILDLGNQVNTGEVVEGVEFQNYTDEERMQKVEKIRVMARSSPLDKYLMVKCLKQKGHVVAVIRDGTNDAPALREADIGLSMGIQDTEVAKQSSDIVILDDNFSSVATILSFQWFNSWNMEENNVFKGTHNLFLRIVGIPNVLQIVMVEFPKKFADAQRLTWEQGRVCIAIAAVSWRIGWTVKFIPVSEKPFFSHTKSLYSLVIRIKQAFCLKIHDAIGKQDSFLAFCVDENVKQKQDSYVLSNS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3207 321 Gene3D - 4 39 IPR023299 GO:0000166
Dere01g3207 321 Pfam haloacid dehalogenase-like hydrolase 17 153 - -
Dere01g3207 321 NCBIfam HAD-IC family P-type ATPase 109 210 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere01g3207 321 SUPERFAMILY HAD-like 28 186 IPR036412 -
Dere01g3207 321 SUPERFAMILY Calcium ATPase, transmembrane domain M 182 263 IPR023298 -
Dere01g3207 321 Gene3D - 40 183 IPR023214 -
Dere01g3207 321 PRINTS P-type cation-transporting ATPase superfamily signature 54 64 - -
Dere01g3207 321 PRINTS P-type cation-transporting ATPase superfamily signature 32 43 - -
Dere01g3207 321 PRINTS P-type cation-transporting ATPase superfamily signature 139 158 - -
Dere01g3207 321 PRINTS P-type cation-transporting ATPase superfamily signature 163 175 - -
Dere01g3207 321 PANTHER CATION TRANSPORTING ATPASE 188 264 - -
Dere01g3207 321 FunFam Plasma membrane calcium-transporting ATPase 2 35 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3207 Dere-ChrDere01 46836295 46838090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3207 159 278 Primary Pumps ATPases AT3G63380 46.721 1.62e-23 99.4