LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g3203	ATGACGACGGGGATCGTACGCGACCAGAACCTGGAAAAACACATTGACAAACACATGGGCTGCATGACTGGTTTTCTCAACATCTTCGATCGCCATCAGATACTCACCGGAAAACGCAACTTCTCCGCTAAACGACTCCCACCTTCTACGGAAGCGATGTCTTCGCCTGAACCAGATAAGTTTGGTGGGTCCCCGGCGTTATCTAGAGAACTGGAGAAGAATCAACCCAGATCAATAGCGTCCCCTGATCGCGTGAAACAGAACACGCCGGCTCCGGAAGCTATAACCCTTACGGAGACTCCGGCGAAGTCACCTCGTTCTCTACCGGTTTTTGAATTCAAGGAAGGCACGCGGTCTTCATGGAAATTCTCCAGAGAGGCTCCTAGGCTATCTTTGGATAGTAGAGCCGTGGTGGATGCCGAAGGAAGCCTTCATCCGAGGCAGATACGAACAAATGCACTAACCTTATTATCCACCAATCGATGCGAGAATCCTGGAGAAGGAGCAGAGAATGATAGTGACCAGCACCGTCGTTCCACAAGCGTTATAGCTAAACTCATGGGACTCGAACCATTGTCGGATTCGGATACTGAACCCGTGAAGAAGGCTGAGCTCCGGAGATCCGCTTCAGAGTCCAGAGTGTCTATAGATTTTTCCCAGTATCGTTTCTTTGACAGCAATTTCCAGCGAAAACAGTTGCAGCAGCAGTCAAACTCTCAGGGTAACATATCCGGCAATGGGGTCCGGGATAATGCAGCTACGATGGACAATCGTACATCCAATAGCAGACATGTAAATCCAAAAGAATTCAGTGTACAAAATGGGAAGAAAGATTCCCCAAAAGCTCCCCTCGGAGGACTTGGACCGAAGAAGAGTTTCTACGAGACTGCTGACTTTTTTCCCGAGCCGAAGCATAACGCATCTATCTATGGAGAGATTAAGAAGAGGTTGAAGATGAGAGGAATTGATGAGCCATCCAAGGATCTCGAGACTAAGAAACAAATCCTCGAGGCCTTGCAGCTAAAGGGTCTGCTACATTCCAAGAAATCCATGACGCAAACCAACCAGAAGAATTTCGTCTTCGACGGAAGCTTGTCAGCGAACGAATCTCCGATTGTCATTATGAAGCCAGTGAGATCTCCAGGATCATTGAATAGACTTGGAAGGGCCGGATATGATTCTCCACCTTCTAGCCTCCGATCAAGTCCACGAGCTCATCGCAACCTAAATATTGCCACCGAGACGCTTCCCGTAGTGAGTCCAAGGCGTGAACGGCCGGAGGTTGATCGGAATACGCGGAGTCAAAACAGAGTCAAAAACTCAACGTCGCTCAATAAGAGCCCAAACAGGAGGATGGTCGTGAACGGGGAGGCACAGAGGAAAATGAATGACCCAGTTGATCCGGTAAGGGTCTCTCCGGTTAATTCGCCCAAGGTTAGTTCAAGAAGGAATGTACCGCAACAGCAAGTGACAAACCGATCACCGAGGATGAGGAAACCAACTGCCGAAATTTACCACAAGGAGAAGGTGTTGTATCCTGCAACAGAGGATGAATTATCTACCATTTCAGAGAGCAGCTTCAGTATGACTTCACAAACTGATGCAGAGAGATACATGTTGGAAGAGTACAAGGAAGGGAGGAATCTGCTGGAGAGGTGTGATAAGCTGCTGCACAGCATCGCGGAAATAACAGAGACCGAGTTGCAACCGAGTCCAGTCTCGGTACTTGACTCGTCGTTTTACAAGGACGAGTCGCCCTCACCTTCCCCAGTGATGAAACGCTGCATTGATTACAAAGATCGACAAGCAGAGTCAGAAGATGATGTCTGGAGTGCAGTTATGTCTTCCATGGAATCCAAATCGGACGGCACATCGGAGGACTGTGATTTTCTTTACGTATCGGAAATCCTGCGAGCTTCGAATTACTTGGGAGAGGACAGCGATGTTTTCACGTTACTGGAGAAGCAGCAGTGTCTCAAGGGAAAAGACACCTCCAGAGCTTCTACATTACAAAGACGGTTGATATTCGACACCATTCGTGAAATCCTAAATCGGAAGCGACAACTGCCGCCGTGGAAGGCGGAGTCTGGTGTAGAGCAGACAACATCAGTACAAAGGATTTGGTCGGAGTTTCGGAGGATCCAAGAGAGGGATGAATCGGAGGACTTGGTGGAGGTGATATGTGGTGTGTTAAGGAAAGACATGGCGGAGGACGCCATGAACGGATGGGAGGAATGTCCGATGGAGAAGGGCGACGTCGTTTTGGATATGGAACGGCTCATATTCAAGGATCTAATCGTGGAAACCATTCGAGATCTCGCGAGTATTGCCGGACAACGCAATAAAGTCTCGGCACTTCGCAGGAGGTTGGTGTTTTGA	2379	0.488	MTTGIVRDQNLEKHIDKHMGCMTGFLNIFDRHQILTGKRNFSAKRLPPSTEAMSSPEPDKFGGSPALSRELEKNQPRSIASPDRVKQNTPAPEAITLTETPAKSPRSLPVFEFKEGTRSSWKFSREAPRLSLDSRAVVDAEGSLHPRQIRTNALTLLSTNRCENPGEGAENDSDQHRRSTSVIAKLMGLEPLSDSDTEPVKKAELRRSASESRVSIDFSQYRFFDSNFQRKQLQQQSNSQGNISGNGVRDNAATMDNRTSNSRHVNPKEFSVQNGKKDSPKAPLGGLGPKKSFYETADFFPEPKHNASIYGEIKKRLKMRGIDEPSKDLETKKQILEALQLKGLLHSKKSMTQTNQKNFVFDGSLSANESPIVIMKPVRSPGSLNRLGRAGYDSPPSSLRSSPRAHRNLNIATETLPVVSPRRERPEVDRNTRSQNRVKNSTSLNKSPNRRMVVNGEAQRKMNDPVDPVRVSPVNSPKVSSRRNVPQQQVTNRSPRMRKPTAEIYHKEKVLYPATEDELSTISESSFSMTSQTDAERYMLEEYKEGRNLLERCDKLLHSIAEITETELQPSPVSVLDSSFYKDESPSPSPVMKRCIDYKDRQAESEDDVWSAVMSSMESKSDGTSEDCDFLYVSEILRASNYLGEDSDVFTLLEKQQCLKGKDTSRASTLQRRLIFDTIREILNRKRQLPPWKAESGVEQTTSVQRIWSEFRRIQERDESEDLVEVICGVLRKDMAEDAMNGWEECPMEKGDVVLDMERLIFKDLIVETIRDLASIAGQRNKVSALRRRLVF	792

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	230	288	-	-
	Dere01g3203	792	PANTHER	LONGIFOLIA PROTEIN	82	792	IPR033334	GO:0051513
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	187	209	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	80	103	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	230	269	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	40	109	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	420	434	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	378	496	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	474	496	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	395	415	-	-
	Dere01g3203	792	Pfam	Domain of unknown function (DUF4378)	629	768	IPR025486	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	195	209	-	-
	Dere01g3203	792	MobiDBLite	consensus disorder prediction	435	452	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g3203	Dere-ChrDere01	46779150	46782389	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g3203	463	792	TRM (TON1 Recruiting Motif) Superfamily	AT3G63430	43.027	8.55e-69	234