Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3197 ATGGCTTATGAAGATCACGCGCCTCCCTTCCTACACTCTTCCTTCTCCGCCGACACCCGTGACGGCGCGTTGACTTCCAATGACGACCTCGAAAGTTTTTCAGCTCGGGGAGCTGATTCCGACTCCGAGGAGGACTACGATAATGATTCCTCCATGCGAACCTTCACCGCCGCAAGGCTTGAGAATACTGGTTCCACTCCGCGGAACACGAAGATCAAAATGAACAATTCAACGGTCAAGATAGAGAATCCCGATAATGTGAAAGATGGTGATTCCGCTGGAACTGGTGCGGTCGGTACTCCTGCCACTGGACACTCCGTCCCGGGCATTATGGTGGAGGACACAACGAAGATTTTTACTGATAATTTACAAACAAGTGGGGCCTACAGTGCGAGGGAAGAGAGTCTCAAAAGAGAGGAGGAAGCTGGAAGGCTCAAATTCATAGGCCTTTTAAATGACGGTATCGTTGAGCACATGGTTTGGTTGATAGGATTGAAGAATATTTTTGCTAGACAACTACCTAATATGCCCAGGGAGTACATTGTCCGTCTCGTTATGGATAGATTTATTATTGCACAGATGGAGCCAGAGAAGTTTGGTGAGATAGCCTTTTGTGCAATAACAGCTGATGAGCAAGTAAAAGGTTATGGTACCAGACTGATGAATCACTTGAAACAGCATGCACGTGATGTTGATGGGTTGACGCATTTTCTCACATATGCTGACAATAATGCTGTTGGTTATTTTATCAAGCAGGGCTTTACAAAAGAGATCCACTTGGAAAAAGATCGATGGCAAGGGTATATTAAAGATTACGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTACACTGATTTATCAACTATGATTTGTCGACAAAGGCAGGCAATTGATCAGAAGATAAGAGAGCTGTCAAACTGTCACATTGTTTATCCTGGAATCGACTTTCAGAAGAAAGAAGCTGGTGTTCCAAAAAAAATTATCAAAGTTGAGGAATTCCCTGGTTTGAGTAAGTCTAAAATCTCAAATCTCAGCTTAACTTATCAGTATTCTTTGGACTTTAGTGCATGTGTGAAAAACTATGCAGTACCTGTCATCAGAGATAGCACGTTTGGATCCATTATTTTCAGTGTTATTGTAGGTTCTGCATATGAAGTTGATAGCTTATCTTTTAAGCAGTCAATGCATGATCATGTTGATGCTTGGCCATTCAAGGAACCAGTTGATGCACGGGAAGTTCCTGATTATTATGACATCATTAAAGATCCAATGGGTAACAAATTCTACCTTGCTAGAAGCCCATTTTCAAAGCAAAGTTCAATCTGGTCTTCAATCTCTTTCCAGAATTCAGTAGGGACACTTTATGCCTTGCGTTCCGGTGGAGAAACACCATTGTTACTTAAACTCTGTTGGGTCCTTTTATCCCCTGTAACCATGAGCAGTTCTGACCGATTAGTCTTGATTCTGATGCCATCTAGCTGTATATACGTGTTACCTATGACATGGTAA 1524 0.4245 MAYEDHAPPFLHSSFSADTRDGALTSNDDLESFSARGADSDSEEDYDNDSSMRTFTAARLENTGSTPRNTKIKMNNSTVKIENPDNVKDGDSAGTGAVGTPATGHSVPGIMVEDTTKIFTDNLQTSGAYSAREESLKREEEAGRLKFIGLLNDGIVEHMVWLIGLKNIFARQLPNMPREYIVRLVMDRFIIAQMEPEKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMICRQRQAIDQKIRELSNCHIVYPGIDFQKKEAGVPKKIIKVEEFPGLSKSKISNLSLTYQYSLDFSACVKNYAVPVIRDSTFGSIIFSVIVGSAYEVDSLSFKQSMHDHVDAWPFKEPVDAREVPDYYDIIKDPMGNKFYLARSPFSKQSSIWSSISFQNSVGTLYALRSGGETPLLLKLCWVLLSPVTMSSSDRLVLILMPSSCIYVLPMTW 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3197 507 Pfam Acetyltransferase (GNAT) family 189 254 IPR000182 GO:0016747
Dere01g3197 507 SUPERFAMILY Bromodomain 398 429 IPR036427 GO:0005515
Dere01g3197 507 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 194 288 IPR016181 -
Dere01g3197 507 ProSiteProfiles Bromodomain profile. 401 429 IPR001487 GO:0005515
Dere01g3197 507 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 134 283 IPR000182 GO:0016747
Dere01g3197 507 CDD NAT_SF 190 230 - -
Dere01g3197 507 MobiDBLite consensus disorder prediction 1 53 - -
Dere01g3197 507 Gene3D - 387 430 IPR036427 GO:0005515
Dere01g3197 507 PRINTS Bromodomain signature 418 434 IPR001487 GO:0005515
Dere01g3197 507 PRINTS Bromodomain signature 404 417 IPR001487 GO:0005515
Dere01g3197 507 PANTHER GH11602P 51 429 IPR037800 GO:0004402
Dere01g3197 507 Gene3D - 146 290 - -
Dere01g3197 507 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3197 Dere-ChrDere01 46646248 46655843 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere01g3197 Acetyltransf_1 6.2e-07 CL0257