Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3189 ATGCAGCACTATCACCCACAACCTCACGTCGCCGCCACTCTCGGTGGCGACGGCAGCGTCATTTCTGATGTCAAGCGCGGCAAAAAGCGTGGCAGTTATAACTGTGGACGCTGTGGTCTTCCTAAGAAGGGTCACAGCTGCCATCTCAAGACTCCCACCTCTGCCTCTGCTCCCACTCCCACTCCCACCGACGTATCAGAATCCAACTTCTCTGCCATTTCCGCGCCTTCATCTGTCTGCACAGTTCGTCAGCCGCCGCCCCGGCAGCCTTACTCTCGCCTTCGTCGCGCGCTATCATTCGATGACTTCGATGACCACACCAGCGGATTGGATCCCCCGGAGATGTCTGATGGAGAGGATCGAGATCTATTTTTCGACCCAGAGCCGGATCTCGATTCATCTGGGTTGCCGGCAAACCTTCTATGGGAAGTGCTAAAGAGGCTGCCGCCGACGGGATTGTTGTCAGCGGCGAAGGTGTGTAAAGGATGGAGGGATACGACTAGGAGGCTGTGGAGAGCAGCGGAAGAGCTCAGACTTAGGGTTCCAGCAGGAGTTCAGGTGGGGTTTGTTGCATCGATGTTGCAGAAGTGTCCGGGGATTGTGAGGCTCTCTCTTAGAATGGAAAGTGATGTGGATTCGACTATGCTGGCTTGCATTGCATTCTCATGCCCCAATCTGGAGTTTATGGAGATATCGACATCCAATACTGCAATCAATCGGATCAATGGGGATGAATTATGTCGATTTGTTGCTGACAAACGAAGCCTGAAGTGCCTCAAGATGGAAGGTTGTCATAATCTTGGGGGTTTTGTTCTGTGTTCTTCTAGTCTTTCAACACTTTGGCTATCAGATCTCTACTCTCTTTCTAAGATGGTATTTAACTGTCCCCAGTTGAGAGAGGTATCATTGGAATTTTCTCGCCAAGAAAATGAAAATACTGATCTAACCACTATGGTTGAAAGTTTGGGAAGAACTTGCCCGAGGTTGCAAAACATACATATAGCTTCAATGCGGCTTTCTAATGCTGCTGTGCTTGCTCTAACAGCTGCCCAGTTGAGGGGGGTACGAATGCTTTCACTTGTTCTTGGATCTGAAGTTACTGATGCATCTGTTGCTGCAATTGCATCTAGCTACCCAAATCTTGAATTGCTTGATCTCAGTGGATCCAGCATCAGTGACAGTGGAATTGGAATAATTTGCAATGTGTTCCCCGAAACATTGTCAAGTCTCCTCCTTGCTCTTTGCCCTAACGTGACCTCAAGTGGGATTCAATTTGCTACAGCTCAATTGCCGCTTCTTGAACTCATGGACTGTGGCATGACCATATGTGATCCTAATTCTGAAAATCAAGCTGCTGATGAAGACAACTGCAAGACATCCAATGCTAATCATCACTCTGTAAATCAAAAGTTAATTATCAAACATAACCGATTGAAGAAACTAAGTTTATGGGGCTGTTCTGGCTTAGATGCCCTATATTTAAACTGCCCGCAGCTCAATGATCTGAATCTAAATTCTTGTAAAAATTTGCATCCAGAGAGATTGTTGCTTCAGTGCCCCAGTTTAGAAATTGTACATGCATCAGGTTGTCAGGGCATGCTAATTGGGGCTATCCAAAGTCAGGTCTGCAATGCTTTTACTGCTATGGAAAATCTATCACCTTGCAAACGTTTACCTGACGGCTCCAAAAGGGTCCAGGTTCCGCATTTTCTTAGTGGCGAGTTGCCTAACGATGGAAAGAAGCGGAGGAAGATTGAGAAACGGCTCTGTAATGTGCTTGTGGACTGA 1788 0.4726 MQHYHPQPHVAATLGGDGSVISDVKRGKKRGSYNCGRCGLPKKGHSCHLKTPTSASAPTPTPTDVSESNFSAISAPSSVCTVRQPPPRQPYSRLRRALSFDDFDDHTSGLDPPEMSDGEDRDLFFDPEPDLDSSGLPANLLWEVLKRLPPTGLLSAAKVCKGWRDTTRRLWRAAEELRLRVPAGVQVGFVASMLQKCPGIVRLSLRMESDVDSTMLACIAFSCPNLEFMEISTSNTAINRINGDELCRFVADKRSLKCLKMEGCHNLGGFVLCSSSLSTLWLSDLYSLSKMVFNCPQLREVSLEFSRQENENTDLTTMVESLGRTCPRLQNIHIASMRLSNAAVLALTAAQLRGVRMLSLVLGSEVTDASVAAIASSYPNLELLDLSGSSISDSGIGIICNVFPETLSSLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNSENQAADEDNCKTSNANHHSVNQKLIIKHNRLKKLSLWGCSGLDALYLNCPQLNDLNLNSCKNLHPERLLLQCPSLEIVHASGCQGMLIGAIQSQVCNAFTAMENLSPCKRLPDGSKRVQVPHFLSGELPNDGKKRRKIEKRLCNVLVD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3189 595 MobiDBLite consensus disorder prediction 46 69 - -
Dere01g3189 595 Pfam F-box domain 134 169 IPR001810 GO:0005515
Dere01g3189 595 SUPERFAMILY F-box domain 134 177 IPR036047 GO:0005515
Dere01g3189 595 Gene3D Ribonuclease Inhibitor 311 444 IPR032675 -
Dere01g3189 595 Gene3D Ribonuclease Inhibitor 126 310 IPR032675 -
Dere01g3189 595 MobiDBLite consensus disorder prediction 49 69 - -
Dere01g3189 595 Gene3D Ribonuclease Inhibitor 453 573 IPR032675 -
Dere01g3189 595 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 161 489 - -
Dere01g3189 595 ProSiteProfiles F-box domain profile. 130 174 IPR001810 GO:0005515
Dere01g3189 595 MobiDBLite consensus disorder prediction 1 25 - -
Dere01g3189 595 FunFam F-box/LRR-repeat protein 17 175 455 - -
Dere01g3189 595 SUPERFAMILY RNI-like 193 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3189 Dere-ChrDere01 46587791 46592852 Dispersed/Wgd