Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3183 ATGCAGTGCTTGAATGAGCAAAAGGGTCGTGGAGGAGCAGGGCTTTTAGAGAAGCGGCGTCTTGAAGATGTGGTAGTGACTATAATTTGGCGAATGGCTCTTTCTGGATCTGCGGTAGAACTTCAAGCTTCTTTGAAGAAGAAAACTGCAGTTTCAAGAAGCTGGATTTTGCTGGACCGGAATGGCGAGGGTACTGTATTGGATGTGGACAAGTATGCTATTATGCGCCGGGTTGAAATTCACGCAAGAGATCTTCGAATTCTTGACCCGCTGTTATCGTACCCGTCCACCATTTTGGGTAGAGAGAAGGTCATTGTCCTCAATTTAGAGCATATTAAAGCTATTATCACTGCAGACGAGGTATTGCTTAGAGACCCGCTGGATGATGATGTTATACCTATTGTTGAGGAACTTCAACGAAGGTTACCCAAAGTATCTGGTACTGGGCAGGGCCAAGGTGAAGAAGAGCCGTGTGCTCAAGAAGTTGAAGCCGATGAAGAACATGAATTTCCGTTTGAATTCCGGGCGTTAGAGGTTGCACTAGAGGGAATTTGTAGTTTTCTTGACGCGCGGACAAGAGAATTAGAGACCGCTGCTTATCCAGCTTTAGATGAGCTTACCTCTAAGATCAGCAGCCGTAATTTGGACAGAGTGCGCAAAATGAAAAGTGCAATGACGAGGTTGACAAACAGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTAGATGATGATGATGATATGGCTGACCTTTACTTATCAAGAAAATTGGCTGCTTCATATTCCCCTGGTAGTGGATCTGATGCTCCCAACTGGATTCTTAGCTCTCCAACTATAGGCTCAAAGATTCACAAATCAAGCAGAACAAGTGCAACAACATTTCAAGGAGAGAATGACGTTGAGGAGCTTGAAATGTTACTCGAGGCATATTTCATGCAAATTGATAGCACATTGAATAAGCTGACCACACTGCGAGAATATATTGATGACACGGAAGATTACATTAACATACAGCTTGACAATTACCGAAATCAACTGATCCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTCTGTCTGTCTATATATTCGTTAGTGGCTGCAATATTTGGTATGAACATTCCGTACACCTGGAAAGAACGGCACGGATATGTGTTTAAATGGGTGGTCATCCTTGGGGGAATTGCTTGTGGATCCTTGTTTTTGTCCATAGTATCCTATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1254 0.4354 MQCLNEQKGRGGAGLLEKRRLEDVVVTIIWRMALSGSAVELQASLKKKTAVSRSWILLDRNGEGTVLDVDKYAIMRRVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITADEVLLRDPLDDDVIPIVEELQRRLPKVSGTGQGQGEEEPCAQEVEADEEHEFPFEFRALEVALEGICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKMKSAMTRLTNRVQKIRDELENLLDDDDDMADLYLSRKLAASYSPGSGSDAPNWILSSPTIGSKIHKSSRTSATTFQGENDVEELEMLLEAYFMQIDSTLNKLTTLREYIDDTEDYINIQLDNYRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWKERHGYVFKWVVILGGIACGSLFLSIVSYARRKGLVGS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3183 417 FunFam Magnesium transporter MRS2-1 43 126 - -
Dere01g3183 417 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 353 402 IPR045863 -
Dere01g3183 417 Pfam CorA-like Mg2+ transporter protein 303 403 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Dere01g3183 417 Gene3D - 39 126 - -
Dere01g3183 417 CDD Mrs2_Mfm1p-like 55 414 IPR039204 -
Dere01g3183 417 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 42 415 IPR039204 -
Dere01g3183 417 Coils Coil 218 245 - -
Dere01g3183 417 Gene3D Magnesium transport protein CorA, transmembrane region 134 347 - -
Dere01g3183 417 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3183 Dere-ChrDere01 46554569 46558368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3183 44 390 MRS2 Gene Family AT5G64560 75.284 4.00e-167 472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3183 01 46554569 46558368 Dere01g3183 01 46554569 46558368 ECH