Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3145 ATGGGTACCAACTTGCACCAGGTACTCAGAAGCCTTTGCTTGAATACTGATTGGAAGTATGCCATCTTTTGGAAACTCAAACATCGTGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTGATGATTATGAATCTTCAGTGAATAAGTCCTGCCAGAAGATCTTGGAACAGATTGGTGGTGGTCAATTCTCACATGACCCTCTTGGGTCAGCCGTGGCTAAGATGTCATGTCATGTATATACGTTAGGGGAAGGCATTGTTGGACAGGTAGCTGTTAGTGGAAAGCATCAGTGGATCTGTGCAGATAATCAAGCTACAGGTTCTGGCTCATCATATGAGTTTGCTGATGGCTGGCAATCTCAGTTTTCTGCTGGAATCAAGACCATTGTTTTTGTAGCTGTAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAAGTGATAGAAGATATGGAGATTGTAACCTATATCAGAAAGCTTTTCCTGGCTACTCAACATTACTCGATAGGCCATGTTCTTAGTCAAATACAAAGTAGTGTGAAAAATTCTTCATCTCTGGATACAGAGAAAATTAAGAAGAGTGAAACACTGAATAATTTGATATCTCTTCCTTTTTCTGGAAAGAACTTTTCAACTTCCTATGTTAATCAGGAAATGGCTGTTGATATGGCCATACATAGGGAGTCTGAATTTAACAGTGATGAAAGTTTCATTTTGCTTCAGTCAATGGCAAATATGATGAATCTGCAGGATCAGAAATTTGTAGAGATGAGATCTCTGAATGAAAGAGAGTATGAAAGGGACAGTAGTGGCTGCAAAGATATGAGGGTGGAATCAGAAAAAAATATCTCATCATTGGCAGACAATTCTGTTATAAATAATCATAGCTTCAATGATTCAATATGTCCGTTAGAAAAGGTTGAAGCTCATTCTGCCTGCAACCCTGCAGACTTTCTTGATGCTGTTGTTTGTGAAAGTGATAAGTTACTTTATATGGAGCTTAACCAAAGAGGTCTTTCAAGTATCCCCAGACCTTCAGATGCAAACTCCCAAAAGGGTACATTGAAGTCAGAATTCCAGACTGAGCCATGTTACAAGGATGCCCGATACACAATGTTGAAGTTCCCTGCTGGCTGTGAGCTGCATGAAGCCCTTGGACCAGCTTTTCTAAAAAGGAGTAAACACTTTGATTCAGAGGCACAGGTGATTCAAGATGTTAAAACTGTGGAGATGCCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGCCAAGAACATCTTTTGGAGGCAGTAGTGGCTAATGTTTGCCACAGTAATAATGATGTAAATAGTGAGTTATCTTTTTGTACATCGGCTCAGTCCAGCATGGCATCTGGAAGAAATCCTGAAGCTTCCATTCACACCATGCGCTCTATTAATTCAGAAGGTTATTCTATGGATCAGCCCTCTCTTGTCAGAGAGGACAAGCAGCCCTGTTTGAGTTCATCAGGGATTTGTGGTGTGATTTCCCCCAAAGGTTTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAGTTTGAAAGGTCTTCTGAACCAGCCAAGAACAAGAAGAGGGCAAGGGTGGGTGAATCTGGTAGGCCTAGGCCAAGGGACAGGCAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGCGCACAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGACAAGCTAAACAAATTTACTGACTCCAAGACAAAGTTGCATCAAACAGAAACAGATGTTCTTGGATCCTCTAGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGGCAGATGCTCGTTGAGATGCTGTGTGAGGAGTGCACGCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGAAGGGTGCAACAGAAGCTCATGGTGAGAAGACATGGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACACAGATTGGATATACTGTGGCCACTTGTTCAAATACTGCAATCCCATAGTACTATATATCAACAATAG 2178 0.4146 MGTNLHQVLRSLCLNTDWKYAIFWKLKHRARMILTWEDAYYDNPDDYESSVNKSCQKILEQIGGGQFSHDPLGSAVAKMSCHVYTLGEGIVGQVAVSGKHQWICADNQATGSGSSYEFADGWQSQFSAGIKTIVFVAVVPLGVVQLGSLNKVIEDMEIVTYIRKLFLATQHYSIGHVLSQIQSSVKNSSSLDTEKIKKSETLNNLISLPFSGKNFSTSYVNQEMAVDMAIHRESEFNSDESFILLQSMANMMNLQDQKFVEMRSLNEREYERDSSGCKDMRVESEKNISSLADNSVINNHSFNDSICPLEKVEAHSACNPADFLDAVVCESDKLLYMELNQRGLSSIPRPSDANSQKGTLKSEFQTEPCYKDARYTMLKFPAGCELHEALGPAFLKRSKHFDSEAQVIQDVKTVEMPDEISCSQLTSESRQEHLLEAVVANVCHSNNDVNSELSFCTSAQSSMASGRNPEASIHTMRSINSEGYSMDQPSLVREDKQPCLSSSGICGVISPKGFSSTCPSSCSEQFERSSEPAKNKKRARVGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFTDSKTKLHQTETDVLGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECTHFLEIAEAIRSLGLTILKGATEAHGEKTWICFVVEGQNNRNVHRLDILWPLVQILQSHSTIYQQ 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3145 725 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 552 595 IPR036638 GO:0046983
Dere01g3145 725 MobiDBLite consensus disorder prediction 525 552 - -
Dere01g3145 725 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Dere01g3145 725 MobiDBLite consensus disorder prediction 529 552 - -
Dere01g3145 725 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 539 588 IPR011598 GO:0046983
Dere01g3145 725 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 721 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3145 Dere-ChrDere01 46068950 46074761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3145 1 717 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.764 1.30e-156 469