Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3143 ATGTCTCACGGAAAAAATATATTTGGGGTGATCTATAAAAAGTACAAGCCTCACCTTCTCATGGTTCTTGTTCAGATGGCTGTCGCATTTCTCTATTTCCTGATAGAGGCTTCATTCAAGAAGGGGATGAACCCTCATGTCTTTGTAACTTATCGGCATGCCCTTGGTGGTATAATAGTGCTTCCTTTTGCTTATGTTCTTGAAAGAAGAGCTAGGCCAAAGCTGACGATGGCAATGTTCATGGAGCTATTTTTGGTTTCCCTTTTAGGGGTCAGCCTCACCCTGAACATGTATTTCGCAAGTTTAAAATATACCTCTCCTTCCTTTGTCACATCAATGCTTAACACAATATCATCTCTTACATTTATAATAGCAGTAGCACTCAGGCTAGAGTCTGTTGATGTTAAGAACCCTCGTGGGCTAGCTAAAATCTTTGGAACCCTTCTGTCATTGGGTGGAGCCTTGACCATGACCTTGTATAAAGGGCATGCAATACCAAGCTTGCAGAGTGCTCCAATCCATATCAGAGGCCAATCTGCTCATGGTAACTGGATTAAAGGAACAGTTTTGACTGTTGCAAGTTGCATATCATGGTCATTATCCTACATAATGCAGGCAATTACAGTAAAGAAATATCCAGCACAGCTTTCTCTCACGGCATGGATGAATTGTATCGGTGCAGTACAATCGGCGGCCTTTACTGTAATCGTTCAACATAAACCTCATGCATGGTTCATTACATCCAGTATTGAACTCTGTTGCATCATATATGCGGGCGTTATATGTTGTGGTTTAGTTATTTTCATCCAGTTATGGACTACAGACCAGAAAGGTCCTGTCTTCGTGACTATGTTCAATCCCCTCGGAACAACTTTAGTATCAATCCTAGCATATTTCGTTTTGGGGGAACAGCTTCACAGGGGCAGTATACTGGGAGGAGTCATTGTTATTATCGGTCTATACTTGCTTTTATGGGGAAAAGAAAGTGATCAAGATTACAAATCACGACAACAATCATGA 1020 0.4127 MSHGKNIFGVIYKKYKPHLLMVLVQMAVAFLYFLIEASFKKGMNPHVFVTYRHALGGIIVLPFAYVLERRARPKLTMAMFMELFLVSLLGVSLTLNMYFASLKYTSPSFVTSMLNTISSLTFIIAVALRLESVDVKNPRGLAKIFGTLLSLGGALTMTLYKGHAIPSLQSAPIHIRGQSAHGNWIKGTVLTVASCISWSLSYIMQAITVKKYPAQLSLTAWMNCIGAVQSAAFTVIVQHKPHAWFITSSIELCCIIYAGVICCGLVIFIQLWTTDQKGPVFVTMFNPLGTTLVSILAYFVLGEQLHRGSILGGVIVIIGLYLLLWGKESDQDYKSRQQS 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3143 339 PANTHER WAT1-RELATED PROTEIN 17 331 IPR030184 GO:0016020|GO:0022857
Dere01g3143 339 Pfam EamA-like transporter family 18 155 IPR000620 GO:0016020
Dere01g3143 339 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Dere01g3143 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 328 - -
Dere01g3143 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g3143 Dere-ChrDere01 46059468 46061351 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3143 13 331 Nodulin-like Gene Family AT4G08300 35.890 6.79e-79 244