Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3132 ATGGATTACTACTCTTCCTTGTCGTGGAAAGAGTTATATTCATTGAGCAACATGGACTACAGTCTTCCATTGAGCTCCAGTACTGAAGTCACAGACAAGGGAATGATGAAAGAACTATCCTGGGAATCCAATTCTTCATCTTCATCCTCCACCGGAGGAGTAATGAAGTGTTCACAATCACAAGAACTCGCCTCCCAACAACCATCGCCACCCAAAAGAGAGAAGAGGCCGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAATTCGCGGCGGAGATAAGGGACTCCACCAGAAATGGGGTTCGACTGTGGATTGGAACATTTGAAACTGCCGAGGCTGCTGCTTTGGCTTACGATCAAGCTGCTTTCCTGACACGTGGGTCACTGGCCAAGCTTAATTTCCCAGAGCATGTGGTGAGGGAGTCTCTTGCTGAGTTTGGATGTAAGGGTGGTTGCTCTTCCTCGCCTTTGTTGGAACTCAAAAGGCGGCACACCTTGAGAACCACCAAGTCCAAACCTAATGCGAAAAGAAAGATGAAAGGGAATTGCGAGGAGGCGGAGTTAAAGGGCAATGAAAATGTGTTAGTTTTGGAGGACTTGGGTGCTGAATATCTGGATCAACTTCTCACCTATTCGTCTCACATTGCTGCTGCTTCTTGGAGCTGA 666 0.485 MDYYSSLSWKELYSLSNMDYSLPLSSSTEVTDKGMMKELSWESNSSSSSSTGGVMKCSQSQELASQQPSPPKREKRPYRGVRRRPWGKFAAEIRDSTRNGVRLWIGTFETAEAAALAYDQAAFLTRGSLAKLNFPEHVVRESLAEFGCKGGCSSSPLLELKRRHTLRTTKSKPNAKRKMKGNCEEAELKGNENVLVLEDLGAEYLDQLLTYSSHIAAASWS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3132 221 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 PANTHER DNA-BINDING DOMAIN 43 210 IPR044808 GO:0003700|GO:0009873
Dere01g3132 221 MobiDBLite consensus disorder prediction 38 81 - -
Dere01g3132 221 SMART rav1_2 77 141 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 Pfam AP2 domain 78 123 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 Gene3D AP2/ERF domain 77 137 IPR036955 GO:0003700|GO:0006355
Dere01g3132 221 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Dere01g3132 221 MobiDBLite consensus disorder prediction 38 68 - -
Dere01g3132 221 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Dere01g3132 221 FunFam Ethylene-responsive transcription factor 2 76 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3132 Dere-ChrDere01 45931457 45932122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3132 58 209 AP2-EREBP Transcription Factor Family AT3G23240 53.896 7.96e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere01g3132 AP2 4.3e-12 CL0081