Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3116 ATGGGGAAGGAACAAATCCCAGTGTTAAATGCACTGGATACAGCAAAAACACAATGGTACCATTTCACGGCAATCATAATTGCAGGAATGGGGTTCTTCACAGATGCATATGATTTATTTGTGATTTCGCTGGTCACAAAATTGCTTGGGCGGGTATACTACCATGTGGATGGTGCAGCGAAACCTGGGACATTGCCTCCCAATGTGTCAGCTGCAGTGAATGGCGTGGCCTTCTGTGGCACACTCTCTGGGCAACTCTTCTTTGGCTGGCTAGGAGACAAGATGGGGCGTAAAACAGTATACGGCGTGACTCTGGTAATGATGATCTTATGCTCCATTGGCTCTGGCCTTTCCTTTGGACACACCCCTAAAACTGTCATGACAACTCTCTGCTTTTTCCGCTTTTGGCTTGGCTTTGGTATTGGTGGAGACTACCCTCTTTCTGCTACCATCATGTCTGAGTATTCGAACAAGAAGACTCGTGGTGCTTTCATTGCTGCAGTTTTTGCAATGCAGGGTTTTGGGATTTTGGCTGGTGGGTTGTTTACAATGATCTTGTCTGCTGCGTTCAAGTCTAAGTTCGATGCTCCTCCTTACGAGGTTGATCCAGTTGGGTCAACTGTTCCACAAGCAGACTTTGTTTGGAGGATAATTCTAATGGTGGGGGCTGTCCCAGCTGCACTGACCTTTTATTCGAGAATGAAAATGCCTGAAACTGCCCGTTACACTGCACTTGTTGCCAAGAACGCAGAGAGAGCAGCAATAGATATGGCTAAGGTTTTGCAGGTGGATATTCAAGTTGAGCCCCAGAAAGTTGAGCAATCTCATCAGTCAAAGGCAAACTCATTTGGCTTGTTCTCAAAAGAGTTCCTGACTCGCCATGGTCTTCATTTGCTTGGAACCTCAAGCACATGGTTCTTGCTTGACATTGCTTATTACAGCCAAAACCTCTTCCAGAAGGACATATTCAGTGCAATTGGATGGATTCCCCCTGCTAAAACAATGAATGCTCTTGAGGAGCTTTTCTTAATTGCAAGGGCTCAAACGCTTATTGCTTTGTGCAGCACAATTCCAGGCTACTGGTTCACAGTGGCTTTCATTGACAAATTGGGAAGATTCACTATACAACTGATGGGGTTCTTTTTCATGACTGTGTTTATGTTTGCTCTAGCCATTCCTTACAACCACTGGACTGTCAAGGAGAACCAAATTGGGTTTGTGGTGATGTATTCCCTGACCTTCTTCTTTGCAAATTTTGGACCTAATGCTACCACATTTGTTGTGCCAGCAGAAATTTTCCCAGCCAGATTCAGATCAACCTGTCATGGCATATCATCAGCGTCAGGAAAGCTGGGGGCTATTGTTGGCGCTTTTGGGTTCCTCTATTTGGCACAGAGTCCAAACCCCAGCAAGGTAGATGCAGGGTACACTACGGGTATTGGGGTGAAGAATTCACTACTTGTGTTGGCTGTGGTTAACTGTTTGGGCTTCTTTCTCACGTTCCTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAAATGTCTGGTGAGAATGAGGCGAAAGATGAAGGCAAGGTAGATCCATGCTAA 1590 0.4572 MGKEQIPVLNALDTAKTQWYHFTAIIIAGMGFFTDAYDLFVISLVTKLLGRVYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKTVYGVTLVMMILCSIGSGLSFGHTPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGLFTMILSAAFKSKFDAPPYEVDPVGSTVPQADFVWRIILMVGAVPAALTFYSRMKMPETARYTALVAKNAERAAIDMAKVLQVDIQVEPQKVEQSHQSKANSFGLFSKEFLTRHGLHLLGTSSTWFLLDIAYYSQNLFQKDIFSAIGWIPPAKTMNALEELFLIARAQTLIALCSTIPGYWFTVAFIDKLGRFTIQLMGFFFMTVFMFALAIPYNHWTVKENQIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQSPNPSKVDAGYTTGIGVKNSLLVLAVVNCLGFFLTFLVPEAKGKSLEEMSGENEAKDEGKVDPC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3116 529 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Dere01g3116 529 Gene3D MFS general substrate transporter like domains 20 528 IPR036259 -
Dere01g3116 529 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere01g3116 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Dere01g3116 529 SUPERFAMILY MFS general substrate transporter 11 515 IPR036259 -
Dere01g3116 529 NCBIfam phosphate:H+ symporter 9 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Dere01g3116 529 CDD MFS_PhT 25 507 - -
Dere01g3116 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3116 Dere-ChrDere01 45653007 45654596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3116 1 523 Inorganic Solute Cotransporters AT3G54700 81.644 0.0 895